Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCAP_0717 |
Symbol | pcrA |
ID | 3828917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
Kingdom | Bacteria |
Replicon accession | NC_007633 |
Strand | - |
Start bp | 832070 |
End bp | 834238 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 4 |
GC content | 23% |
IMG OID | 637823869 |
Product | ATP-dependent DNA helicase pcrA |
Protein accession | YP_424677 |
Protein GI | 83319825 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0979617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAG ATAATTTGTT AGATTTATTA AACGATCAAC AATTAGCAGC AGTTTTAAAT ATAGATAAAC CAGTTAGAAT TATTGCTGGA GCTGGTAGTG GTAAAACTAG AGTAATTACA ACTAAAATTG CTTATTTAAT AGAAAAGCAA AACATTGATC CTAGTAGAAT TTTAGCTGTA ACATTTACAA ATAAAGCTGC TAAAGAAATG AAAGAACGTG TTTTGCAAAT TACAAACAAC TCTTTTAAAA GCCCCTTTAT TTCTACTTTT CACTCATGAT GTTCTAAAGT ATTAAGAATT GATGGAAAAC ATATTGGATT AGAAGATAAG TTTTTAATTA TTGATAGTGA TGATCAAAAA AGAATTATTA AATCAGCTTT AAAAGAATCA AATATCGAAC TAAGTGAAAA TGACAAAAAA ACTTTTGATA AAAAAATTCT TTATAAAATA AAAGAATGAA AAGAAGAATT AGTTGATCCA AGTGAAGCTA TTTTAAATGC TACAAGTACT TTAGAAAAAA ACTTTGCAGT TATTTATAGG TTGTATCAAA ATACACTTTT AAAAAATAAT TCTTTAGATT TTGATGATTT GCAAATTTAT GTTTATCGAT TATTTAAACA AAATAATGAA ATTTTAAATA AGTGAAGAAA TGCTTATGAT TATGTTTTAG TAGATGAATT TCAAGATACT AATGAACTTC AATTTAGCTT AATTAAATTT TTAACTATAA ATACTAATCA TTTAACAGTA GTTGGTGATC CTGATCAAAC TATTTATTCT TGAAGAGGTG CTAAATTAGA TATTATTTTA AACTTTAATA AAACATATAG TAATGCTATA AGTATTGTTT TAAATCAAAA CTATAGATCT ACAAAACAAA TACTAGATAT TTCTAATAGT TTTATTAAAA ACAATAAGTT TAGAGAACAT AAAGAAATTT TTACTAATAA TAAATCAGGT AAAAAAGTAG TTTTAAAAGA ATGTAATTCA AAAACTAGTG AAGCTAGTTA TGTAAGCTCT AAGATTAAAG AACTAGTTAA ACAAGGTTAT CATTATAAAG ATATTTTTAT CTTATATAGA ATGAATGCTT GATCTCAAGA ATTTGAAAAA GAACTAGCAA ATAAAAAAAT TCCTTTTCAA TTAATTGGTG GAATTAAGTT TAGAGAAAGA AAAGTAATTA AAGATGCTAT GGCATTTTTA AAAATGATTT CAATTAAAGA TAATTTATCT AGTCAAAGAG TTTTAGGTTT AATTCCAAAA ATTGGAAATA TTACAATTGA AAAAATTATA AATACTGCTA ATTTAAACCA TTTAAATATA TTTGATTTAA TTACAAATGA AGACAAAACA CTTTTACATT CAATTACTAA AAATTTAGAT GAACTTATTG AAGTGTTTAA AACAGCTCAT CAATTATATT TAGATAATAC AAATATTGAA GAAATTTTAA AATATTTACT AATTCAATCT GGTTATGAAA ATAAATTAAA AATTAGAAAA GAACAAGATG ATTTAGAAAA TATTAACGCT TTATATGATC AATTAAAAAG ATTTGATGAA GATTTTGATC CAAAGTATTA TAGTGAAGAA AATAAACTAA TTGCTTTTTT ACAAGAAGAA GCTTTAACTA GTGATATTGA TGAAGCTGAA CAAATTGATA AAGTTTCATT ACTAACAGTT CATGCTGCTA AAGGATTAGA AAATAAAGTA GTTTTTATTA CCGGATTAAA CCAAGGAATT TTTCCATCAC GAATATCTGA AACTAGTATT AATGAATTAG AAGAAGAAAG ACGTGCTTTG TATGTTGCTT TAACTAGAGC AAAAGATGAG TTATTTTTAA CTTATGTTAA AGGCGATTAT TCTCATATTA TGCAATCAGA ATTAAAACCA AGTAAATTTA TTCATGAACT TGATAAAGAC TTATATGAAT TTGAAACTCA ATTTTTAAAT ACTTTACTTT ATGATTCAAA TGATTATAAA CAAAGTTCAT TTTATGTTAG TCCAAAACAA CATAATTTAT ATAATGTTGG TGATCATGTT GAACATAAAT TATTTGGAAA AGGTGTTGTA GTTAAAATAA TTAATGATCA GCTACAAATT TCATTTACAA ATTCAAGTTA TGGAATTATG ATGATTGCTA CTAATAATTC TGCTTTAAGT AAGGTATAA
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Protein sequence | MSVDNLLDLL NDQQLAAVLN IDKPVRIIAG AGSGKTRVIT TKIAYLIEKQ NIDPSRILAV TFTNKAAKEM KERVLQITNN SFKSPFISTF HSWCSKVLRI DGKHIGLEDK FLIIDSDDQK RIIKSALKES NIELSENDKK TFDKKILYKI KEWKEELVDP SEAILNATST LEKNFAVIYR LYQNTLLKNN SLDFDDLQIY VYRLFKQNNE ILNKWRNAYD YVLVDEFQDT NELQFSLIKF LTINTNHLTV VGDPDQTIYS WRGAKLDIIL NFNKTYSNAI SIVLNQNYRS TKQILDISNS FIKNNKFREH KEIFTNNKSG KKVVLKECNS KTSEASYVSS KIKELVKQGY HYKDIFILYR MNAWSQEFEK ELANKKIPFQ LIGGIKFRER KVIKDAMAFL KMISIKDNLS SQRVLGLIPK IGNITIEKII NTANLNHLNI FDLITNEDKT LLHSITKNLD ELIEVFKTAH QLYLDNTNIE EILKYLLIQS GYENKLKIRK EQDDLENINA LYDQLKRFDE DFDPKYYSEE NKLIAFLQEE ALTSDIDEAE QIDKVSLLTV HAAKGLENKV VFITGLNQGI FPSRISETSI NELEEERRAL YVALTRAKDE LFLTYVKGDY SHIMQSELKP SKFIHELDKD LYEFETQFLN TLLYDSNDYK QSSFYVSPKQ HNLYNVGDHV EHKLFGKGVV VKIINDQLQI SFTNSSYGIM MIATNNSALS KV
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