| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA3106 |
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| Symbol | clpB |
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| ID | 3104949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 3293305 |
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| End bp | 3295884 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637172232 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
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| Protein accession | YP_115493 |
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| Protein GI | 53802726 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.652443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGG ACAAACTGAC CAGCAAATTT CAGGCGGCCC TCGCCGATGC CCAGAGCCTG
GCGCTCGGAC GTGATCATCA GTTCATCGAA GCGGTGCACG TGATGTCGGC GCTGCTCGAT
CAGGAAGGCA GTACGGTGCG GCCGCTGCTG ATTCAGGCCG GAGCCGACGT GCCCCAACTG
CAGCAGGCCT TGGGTGCGGC GCTGGAGCGT CTGCCGGTGG TGGAAGGCGT CGGCGGGGAC
GTGCAGATTT CGGCCGAGCT GTCGCGGGTG CTGAACCTGA CCGACAAACT CGCCCAGAAA
CGCGGTGACC AGTTCATCAC CAGCGAGATG TTCGTGCTGG CGGCGCTGGA ATCGCGCGGC
GAACTTGCCG AGCTCCTGCG CAAGGCCGGC TTGACCAAGG AAGCCTTGGA ACACGCGATC
CAGGCGATGC GTGGCGGCCA GGCGGCGGAT GATCCGAACG TGGAGGACCA GCGTCAGGCC
TTACAGAAAT ACACTATCGA TCTGACCGAG CGTGCCGAAC GCGGCAAGCT CGATCCGGTG
ATCGGCCGGG ACGACGAAAT CCGCAGGACC ATTCAGGTGC TGCAGCGGCG CACCAAGAAC
AATCCGGTGC TGATCGGCGA ACCGGGCGTG GGCAAGACGG CCATCGTCGA GGGATTGGCC
CAGCGCATCG TCAACGGTGA AGTGCCGGAA GGCGTCAAGG GCAAGCGCCT GCTGGCTCTG
GACATGGCGG GGCTGATCGC CGGGGCGAAG TTCCGTGGTG AGTTCGAGGA GCGGCTGAAG
GGCGTCCTCA ATGACATCGC CAAGCAGGAA GGCCGCGTCA TCCTGTTCAT CGACGAGTTG
CATACGATGG TCGGCGCCGG CAAGGCGGAA GGGGCCATGG ATGCCGGCAA CATGCTCAAG
CCGGCACTGG CGCGCGGGGA ATTGCACTGC ATCGGGGCCA CCACGCTGGA CGAATACCGC
AAATACATAG AAAAGGATGC GGCGCTGGAA CGGCGCTTCC AGAAGGTGCT GGTGGATGAG
CCGACCGTCG AGGACACCAT TGCCATTCTG CGGGGCCTGA AAGAACGCTA CGAGGTCCAT
CACGGCGTCA CCATCACCGA TCCGGCGATC GTGGCCGCCG CCACGCTGTC GCACCGTTAC
ATCACCGACC GCCAGTTGCC GGATAAGGCC ATCGACCTGG TGGACGAGGC CGCCAGCCGC
ATCCGCATGG AGATCGATTC CAAGCCGGAG GAAATGGACC GGCTCGACCG CCGTCTGATC
CAGCTCCGGA TCGAACGCGA AGCTTTGAAG AAAGAGACCG ACGAGGCATC GAAGAAGCGG
CTGGAGGCAC TGGAAGGCGA GATCGGCAAG CTGGAAAAGG AATACGCCGA TCTGGAGGAG
ATCTGGAAGA GCGAAAAGGC CCGGCTCTCC GGCGCCGCCA GCATCAAGGA GGAACTGGAA
AAGGCCCGGC TCGACCTGGA CAACGCCAAG CGCAGCGGCG ATCTGACCCG CGCCGGCCAG
ATCCAGTATG AACGGATCCC GGCTTTGGAA AAACGGCTGG CCGTGGCCGA AGCCGGTGAG
GATAGCGAGT TCCGCCTGCT GCGCAACAAG GTCACCGACG AGGAAATCGC CGAGGTCGTT
TCCAAATGGA CCGGAATTCC GGTGGCGAAG ATGCTCGAGG GTGAGCGTGA GAAACTTTTG
CACATGGAGG AGAACCTGAG CCGGCGGGTG GTTGGCCAAC AGGAGGCGAT TACCGCAGTG
GCCAACGCCA TACGCCGGTC CCGCGCGGGT CTGGCCGATC CCAACCGGCC GAATGGATCA
TTCCTGTTCC TGGGGCCGAC CGGCGTGGGC AAGACCGAAT TGTGCAAGGC GCTGGCCGAA
TTCCTGTTCG ACACCGACGA GGCGATGGTA CGCATCGACA TGTCGGAATT CATGGAAAAG
CATTCGGTCG CCCGCCTGAT CGGGGCACCG CCCGGCTATG TCGGGTACGA AGAGGGCGGT
TATCTCACCG AGGCCGTGCG GCGCAAGCCC TATTCCGTGA TCCTGCTGGA CGAAGTCGAA
AAGGCCCATC CGGACGTCTT CAACGTCTTG CTGCAGGTGC TGGACGATGG CCGCCTCACC
GATGGCCATG GCCGTACTGT GGATTTCCGC AATGCGGTGG TGGTGATGAC CTCCAACCTG
GGCTCCAATC GCATCCAGGA GTTGGCGGGG GAGGCGCATT ACGCCGAGAT GAAGGCCGAG
GTCATGGAAA TCGTGGGTCA GTATTTCCGG CCGGAGTTCA TCAACCGCAT CGACGAGGCG
GTGGTGTTCC ATCCCTTGGG GCGGGAGCAG ATCCGCGCCA TCGCCCGGCT CCAGGTCCGC
CATCTCCAGG AACGCCTGGA GGCGCGCGAA CTGTCCCTCG TGGTATCGGA TGCTGCGCTG
GACCTGCTCG GCGAGGCCGG ATTCGACCCG GTCTATGGGG CGAGGCCGCT GAAGCGGACC
ATTCAGCAGG AACTGGAAAA TCCTCTGGCG CTGGACATAC TCGCCGGCCG CTTCGCAGCC
GGCGACGTGA TCGGGGTGGA TGTCGAGAAC GGAAAGCTGC AATTCTCCCG GATGGGCTGA
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| Protein sequence | MRMDKLTSKF QAALADAQSL ALGRDHQFIE AVHVMSALLD QEGSTVRPLL IQAGADVPQL
QQALGAALER LPVVEGVGGD VQISAELSRV LNLTDKLAQK RGDQFITSEM FVLAALESRG
ELAELLRKAG LTKEALEHAI QAMRGGQAAD DPNVEDQRQA LQKYTIDLTE RAERGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GVKGKRLLAL
DMAGLIAGAK FRGEFEERLK GVLNDIAKQE GRVILFIDEL HTMVGAGKAE GAMDAGNMLK
PALARGELHC IGATTLDEYR KYIEKDAALE RRFQKVLVDE PTVEDTIAIL RGLKERYEVH
HGVTITDPAI VAAATLSHRY ITDRQLPDKA IDLVDEAASR IRMEIDSKPE EMDRLDRRLI
QLRIEREALK KETDEASKKR LEALEGEIGK LEKEYADLEE IWKSEKARLS GAASIKEELE
KARLDLDNAK RSGDLTRAGQ IQYERIPALE KRLAVAEAGE DSEFRLLRNK VTDEEIAEVV
SKWTGIPVAK MLEGEREKLL HMEENLSRRV VGQQEAITAV ANAIRRSRAG LADPNRPNGS
FLFLGPTGVG KTELCKALAE FLFDTDEAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNVL LQVLDDGRLT DGHGRTVDFR NAVVVMTSNL
GSNRIQELAG EAHYAEMKAE VMEIVGQYFR PEFINRIDEA VVFHPLGREQ IRAIARLQVR
HLQERLEARE LSLVVSDAAL DLLGEAGFDP VYGARPLKRT IQQELENPLA LDILAGRFAA
GDVIGVDVEN GKLQFSRMG
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