| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2974 |
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| Symbol | |
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| ID | 3104384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 3147994 |
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| End bp | 3150495 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637172099 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_115363 |
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| Protein GI | 53802845 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR02913] probable extracellular repeat, HAF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGGG CAACGGGTGA GGACATGAAT CCATTCAACG ATAAATTCCA TTTGAAATCA
TTGGCTATAT CGATTATCGG CGCTTACGGC GCAGTTTCTT CGTCGGGAGT GATGGCGGCC
GTCTACAGCG TCACTCCCAT CACCTCACTC GCCGGTAATG TCGATGTCAC GGACATCAAT
GATGGCGGAC AGGTTGTCGG CTATTTCGAT TCCGGGGACG ACAAGCATTC GCCCCATGCC
TTTCTCTTCG CCGATGGCGG CATGATCGAT CTCGGGGTGT TGGCCGGCGG CAGGAGCAAA
TCCTGGAACA TCAACAATGC ATCTGCCGTG GTAGGGCAAT CGGGTAACGA GCAGAATCCC
ATCGCGTTTT ATTACAGTTA TTATGGTAAT AAAAAGATGG TCGATCTCGG CTTGCCTCAA
GGGGGCACGG CCGTCGTTGC CTCGGCCATC AACAATAATG GCCAGATCGT GGGATGGGCC
AAGATCGAAG ACGTCAGACA TGCTTTTCTG TACAGCAATG GCGCTTTTTC CGACCTCGGT
ACGCTGGGGG GAGATTCCAG CTTCGGCACA GGTGTCAATG ACGCCGGCCA GGTTGTGGGG
TATGCAGAAA CGGGCGCCAA GACTCCTCAC GCATTCCTGT ACGACAACGG CAACAAGATC
GATCTGGGGA CACTGGGGGC CGACAGGAGC TACGCTACCG CTATCAACAA CGTCGGCCAG
GTGGTCGGGT ATTCGGACGT CTCCGCCGGC GTGACCCACG CATTCGTGTA TAGCAATGGC
GCCATGGTGG ACATCGGTAC TTTGGGCGGG GGGAGCAGCC AGGCCCTGGG GATCAATGAT
GCCGGCAAGA TCGTCGGTAT GTCCACGACG ACCGGTGGTC AGCAGCACGG TTTCCTCTAC
AGCGATGGCA AGATGTATGA CTTGCATGAT CTGATTCCGG CGGAGGCGAA CATCGTGTCG
GCCACCGAGA TTCAGGGTAT CGCCATCAAC AACGCCGGTC AGATCGCGCT CACGGCAAGA
ACCGGAGCGA ACCGGCGTGG TCTGTTACTC ACGCCGAACC TCCCGTCGGC GGTGGTCGAG
GGACCTGCCG GTAACATCGC CGAGAACGTA AAGGTGACGC TGGACGGTTC CCACAGCACC
GCGCCGGCCT GTTCACGGCA GGGGGCTCCG AAGCCATGCC CGGTTTTCTC CTGGTCGCAG
GTCGGAGGTC CGGGCGTCAG TCTGAAGGGA GCCGACACCG CTACCGCGAG TTTCACCACC
CCCGTCCTGG GATCAGGCCA AAAAAGCAAG GTGCTGAGCT TCAAATTGAG GGTCAGTGAT
GGCCTGTTCA GTGACGAGGA ACTCATCGAC GTCACCGTGG TGTCCAGCAA CGCCATCAAT
CAGCCGCCGG TCGCCGATGC CGGTGACGCG CAGACGGTGA GGGCGGGGGC AAGCGTGCAT
CTCGATGGCT CCGGCAGCTA TGACCCGGAA GGGGGGAAGC TTACCTATGC ATGGAGTAAT
GTTTCGGCAG GCGAGCCGTG CAACACGGTG GTGTTGGACA ATAGCGCGAC CTCCTCGCCG
GGTTTCACGG CACCCCTGGT CGGCCAGACG CCGCAAACCT GTACGTTCTC TCTCACGGTG
ACCGACGAGG AGGGGTTGGC ATCGACCCCT TCGAGTGTCA ATGTGACCGT GGAAAACACC
AATCATCCGC CGGTGGCGAA CGCGGGCACC GATCTGACGG TGCATACCGG CGACACCGTG
AACCTGAACG GCAGCGGCAG CACCGACCCG GACGGTGATC CTTTGACATA TGCGTGGGTT
CAAACCGGCG GACCCACGGT GGTTCTGAAC GGCGCTGACA CAGGGGCGCC GAGCTTCGTC
GCTCCGGTGG TGACGGCCGG GAACGACACG CTGGCATTTC AGCTCACCGT CAGCGACGGT
TTTCTGACGG CCAGTGCGTC GATGAACGTG AAAGTCCTGA GCGCGGGCGC CTCTCCGAGC
CCGGCACCGA CGGCCTCTCC GACCCCGGCG CCCACCACGT CCCCGAATCC GACACCGACA
CCGGCTCCGA CGTCCAGTCC CAGCCCGACA CCCGCACCGA CGCCGAATCC CGTCTGTGAT
CGCGCCGTGG TTGATCCCTC GCGACTCTGG GCGCCGGATC ACAAGATGCG GCGCATCCTT
CTCAAGGAGC TCGGGGAAAG CGCTCAGTCT CCAGCGTCGA ATGCGATGAC GGTCAAGATT
CTTTCGGTCA TGCAGGACGA GCCGGTCCGC CGGATCAACA GTGCCGACAG CAGTCCCGAC
GCGGTCATCG TGCACAAGGC GACGGGTGAC AAGGTGAGGT TGCGGGCCGA GCGCGCCGGC
AAGAAGAAAA ACGGCAACGG GCGGGTCTAC ACCATCGGCT TCAGCGTGAC CGATACGCAG
CAAAACGTCT GCGAAGGAAC GGTCAAGGTG TGCGTGCCTT TGAAAAAGAA GGAAAGCTGT
GTGGACGATG GCGCGCTTTA CGACTCGCTG TCGAAGCGAT AA
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| Protein sequence | MIWATGEDMN PFNDKFHLKS LAISIIGAYG AVSSSGVMAA VYSVTPITSL AGNVDVTDIN
DGGQVVGYFD SGDDKHSPHA FLFADGGMID LGVLAGGRSK SWNINNASAV VGQSGNEQNP
IAFYYSYYGN KKMVDLGLPQ GGTAVVASAI NNNGQIVGWA KIEDVRHAFL YSNGAFSDLG
TLGGDSSFGT GVNDAGQVVG YAETGAKTPH AFLYDNGNKI DLGTLGADRS YATAINNVGQ
VVGYSDVSAG VTHAFVYSNG AMVDIGTLGG GSSQALGIND AGKIVGMSTT TGGQQHGFLY
SDGKMYDLHD LIPAEANIVS ATEIQGIAIN NAGQIALTAR TGANRRGLLL TPNLPSAVVE
GPAGNIAENV KVTLDGSHST APACSRQGAP KPCPVFSWSQ VGGPGVSLKG ADTATASFTT
PVLGSGQKSK VLSFKLRVSD GLFSDEELID VTVVSSNAIN QPPVADAGDA QTVRAGASVH
LDGSGSYDPE GGKLTYAWSN VSAGEPCNTV VLDNSATSSP GFTAPLVGQT PQTCTFSLTV
TDEEGLASTP SSVNVTVENT NHPPVANAGT DLTVHTGDTV NLNGSGSTDP DGDPLTYAWV
QTGGPTVVLN GADTGAPSFV APVVTAGNDT LAFQLTVSDG FLTASASMNV KVLSAGASPS
PAPTASPTPA PTTSPNPTPT PAPTSSPSPT PAPTPNPVCD RAVVDPSRLW APDHKMRRIL
LKELGESAQS PASNAMTVKI LSVMQDEPVR RINSADSSPD AVIVHKATGD KVRLRAERAG
KKKNGNGRVY TIGFSVTDTQ QNVCEGTVKV CVPLKKKESC VDDGALYDSL SKR
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