Gene MCA2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2942 
Symbol 
ID3104549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand- 
Start bp3125852 
End bp3126502 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content58% 
IMG OID637172070 
Productprophage MuMc02, nuclease, putative 
Protein accessionYP_115334 
Protein GI53802905 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.375298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATC CGATGAGGAG AACATTTATC TGGGCGGTGC TGATGGGTGT GACGGTGGCT 
GCGCATGCAG ACGATTGGAG TGGCAAAGTG GTCGGTGTCA CTGATGGTGA TACGCTCACG 
ATCATGAAAG GCGGCCGCGG CGCCAAGGTG CGCCTGGCAG AAATCGACGC TCCGGAGTCC 
CATCAAGATT ACGGCGCAAA ATCCAAGCAA TCATTGAGCG ACTTGTGTTT CGGCAAAGAA 
GCCAAAGTTA ACGATCAGGG CGCCGACAAA TATGGCCGGA GACTGGGACG CGTGAGCTGC 
GCAGGTATTG ACGTCAATCT GGAACAGCTC AAGCGCGGCC TAGCCTGGTT CTACGTCGAA 
TACGGCCACG ACCCCGCTTT GAGGGCTGCG GAAGAACAGT CTCGCGCCAG TAGAATCGGT 
CTGTGGAGTG ATGCCAATCC GACGCCCCCA TGGGATTTCC GGCACGGCAC CCCAAAGAAG 
GCTGCGCGTT CTACGGATGA GGCCGACGGT TCCGCAAGCG ACTGTGGCGG TAAGTCGACG 
TGCAAGCAGA TGACCAGCTG CGCCGAAGCA CGCCACTATC TCAACGACTG CGGTGTGAGC 
CGGCTTGATC GGGATCGCGA CGGAATTCCA TGTGAATCGA TTTGTAGATA G
 
Protein sequence
MENPMRRTFI WAVLMGVTVA AHADDWSGKV VGVTDGDTLT IMKGGRGAKV RLAEIDAPES 
HQDYGAKSKQ SLSDLCFGKE AKVNDQGADK YGRRLGRVSC AGIDVNLEQL KRGLAWFYVE 
YGHDPALRAA EEQSRASRIG LWSDANPTPP WDFRHGTPKK AARSTDEADG SASDCGGKST 
CKQMTSCAEA RHYLNDCGVS RLDRDRDGIP CESICR