| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2608 |
|---|
| Symbol | |
|---|
| ID | 3103892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2796587 |
|---|
| End bp | 2799064 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637171743 |
|---|
| Product | mechanosensitive ion channel family protein |
|---|
| Protein accession | YP_115013 |
|---|
| Protein GI | 53803254 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.349131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGGCG CCCAGCATGG GACATGCAAG CTCACGGTAA CGATGACTCG AATCCGCTCG
AATAAATTCC GCCTCGTCTT TTCCCTGTTT CTGCTGATGG CCGCGGTGTT CGCCTCCGCC
TCTGCCCAGG AACCGGCGGG CGAGAAGCCG CTGGCCTCCC AGGTCAAGGA CTGGCAGGCG
TTGCTCGACC GCTACGAGAA AACCCTCGCC AAAGGTGAGG TGGATGACGA CCGGCTGGTC
GAAATCCGGG CCGAACTGGC TTCCCTACGC CTGGAAGTCC GTTCAGCCGC CGATCTGGCC
CGGCCCCTCG TGCAATCCGC CCGAGACGAG CTGGCGGCGC TCGGGCCGCC GCCCGGCGAG
GGGGAACCGC CGGAGGCGGC GGGCATCGCC GCCAAGCGCA AAGCCATTGC CGAACGCCTG
GCGAACATGG AGGGCAGCCT GAAAGAAGCC GATCTGGTCA TTACCCGCGC CGAAGGCATG
ACCCAACGGC TCCAAGCCCT GCGACGCACG CGCTTCACCG AACGGGTGCT GAGCCGCGGC
CCCTCACCGC TCTCCCCCGC CGTATGGCGC AAGGGAATTC AGGAAATGGC GGAAGGCGCC
GCGTCCCTGC GCCAGGACTT CGCAGCATGG CTGACCGGCG AAGGCGCAGC CGCCCAACTC
GGCCAAATGC GCTGGCGATT GCCTCTGGCG GTCCTGACGG CCGTGGTCAT CGCCTGGCCG
CTGCGACTCT GGTTCGTCCG GCGCTTCGGC TACGTCGAGC TTACCGCCGA ACCGAGCTAT
GGTCAGCGGC TCCGCACCGC CCTGGTCACC GGCGTCATCC GCACACTGAT CCCCTCGGTG
GCCGTCCTGG CGCTCTATCT GGGATTCACT GCCGGCGATC TGGTGTCGGA CCGCGTTCAG
CGCATCATCG AACCGTTGGC GGCGATGCTG GTGACGTTCT TCTTCGTCGT GGCTTTCTGC
CGGGCGGCAC TGGCGCCCGG CGAACCGCTG TGGCGGCTGG TCGCACTCGG TGACCCCGGC
GCCAAGGTCA TCGCCCGCAT CGTTACGGCC ATGACGGCGG TATTCGCCAT CGATGCCGTC
GTCAACGTCT GGGGCGAGCG GTTCGAGTGG TCCGTGGAAC TCATGGCCTT GCACAACTTC
GTGACCGGCC TGTCGATCGC ACTGCTGCTG CTGGTGCTCC TGCGGCGGCG GATTTGGGAA
TCCGAACTCG GCACCGCGCG CTGGCCAGGT CTGCGCTACG CGCTGACTCT GCTCGTCTAT
GCCATTCCGA TCGCCGCTTT GCCGGGTTAC GTGGTGCTGT CGCGCCTGCT CGCCATCCAG
CTCGTGCTGT CGATCGGGCT CTACGTGTTG GTCACCGTGC TGACCAAGAT CGGCGACGAG
TTCGTCAACC ATACGCTGAG CGAACACGCC ATCGTCGGCA GGCATCTGCG CAGCAATCTG
GAAGTCTCGC CCGAAGGCAT CGATGCCCTG AATTTGTGGC TCACCGGGCT GGTCCGGCTG
GGCATCGGCC TGGCTGGCAT CTTGGCGCTG TTGGTTTTGT GGGGGGCAGG CGGCAGCGAC
CTCAGCAGCT GGCTGTACGA AGCGGTATTC GGTTTCAAGA TCGGGAACAT CACCGTGTCC
CTGGCCGACC TGGCATTCGG CCTGCTCTTG TTCGGGGGAA CGCTGATTCT GACCCGCTTT
GTCCAGCGGA CCCTGGAGCA CCGCATCCTG CCCCGCACCC GCATCGATCC GGGCGTGCAG
CACAGCATCC GCACCGCCGT CGGCTACCTG GGATTCACCC TGGCCCTGAT CACTCTGGTC
TCGGCAGCCG GCTTCGATCT GTCGCAGCTT GCCATCATTG CCGGCGCGCT GTCGGTCGGC
ATCGGCCTGG GCCTTCAGAA CGTGGTCAAC AATTTCGTGT CCGGCCTGAT CCTGCTGGCC
GAGCGGCCGG TCAAGGTGGG CGACTGGATC GTGGTGGGGG AGATTCAGGG CTATGTGAAG
AAGATCAGCG TACGCGCCAC CGAAGTGCTC ACCTTCGACA GCGCCTCGGT ATTCATCCCC
AACTCCGAGC TCATCGCCCA CCCGGTCACG AACCGTACCT ATGCCGACAA GGTAGGGCGG
ATCGTGGTCC CGGTGAGCTT CACCTACGGC ACCGACGCGC GGAAGGTCTG CGAAACCTTG
ATGCGGGTCG CCGCGGCCCA CCCCAAAGTG CTGCGTCAAC CCGGTCCTTC CGTGTTCTTC
AAGGAGTTCG GGTCGAGTTC CATGAACTTC GAAGTCGTCG CCTTCGTCGC CGACGTCGAT
ACCATGAAGT CGGTGACCAG TGAACTCTGC ATCGAGATCG ACGCCGCCTG CCGCCGCGAG
GGCCTGTCCA TGCCCTACCC GCAGCGCGAC GTGCACCTGG ACTTCGACCC GGAGCAATTG
TCCTGGCTGC TGGCCAGGCT GGGTGCGCCG CCGCTCAGCC CGGACGCCCC CGGAGCGCCT
CGGTCAAATG GGGCCTGA
|
|---|
| Protein sequence | MLGAQHGTCK LTVTMTRIRS NKFRLVFSLF LLMAAVFASA SAQEPAGEKP LASQVKDWQA
LLDRYEKTLA KGEVDDDRLV EIRAELASLR LEVRSAADLA RPLVQSARDE LAALGPPPGE
GEPPEAAGIA AKRKAIAERL ANMEGSLKEA DLVITRAEGM TQRLQALRRT RFTERVLSRG
PSPLSPAVWR KGIQEMAEGA ASLRQDFAAW LTGEGAAAQL GQMRWRLPLA VLTAVVIAWP
LRLWFVRRFG YVELTAEPSY GQRLRTALVT GVIRTLIPSV AVLALYLGFT AGDLVSDRVQ
RIIEPLAAML VTFFFVVAFC RAALAPGEPL WRLVALGDPG AKVIARIVTA MTAVFAIDAV
VNVWGERFEW SVELMALHNF VTGLSIALLL LVLLRRRIWE SELGTARWPG LRYALTLLVY
AIPIAALPGY VVLSRLLAIQ LVLSIGLYVL VTVLTKIGDE FVNHTLSEHA IVGRHLRSNL
EVSPEGIDAL NLWLTGLVRL GIGLAGILAL LVLWGAGGSD LSSWLYEAVF GFKIGNITVS
LADLAFGLLL FGGTLILTRF VQRTLEHRIL PRTRIDPGVQ HSIRTAVGYL GFTLALITLV
SAAGFDLSQL AIIAGALSVG IGLGLQNVVN NFVSGLILLA ERPVKVGDWI VVGEIQGYVK
KISVRATEVL TFDSASVFIP NSELIAHPVT NRTYADKVGR IVVPVSFTYG TDARKVCETL
MRVAAAHPKV LRQPGPSVFF KEFGSSSMNF EVVAFVADVD TMKSVTSELC IEIDAACRRE
GLSMPYPQRD VHLDFDPEQL SWLLARLGAP PLSPDAPGAP RSNGA
|
|---|
| |