Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2514 |
Symbol | kdsA |
ID | 3104373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2692114 |
End bp | 2692965 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637171655 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_114925 |
Protein GI | 161579543 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.50415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACG TCGAGACATC GGCCCGGCCG TTCGAACTCT GCGGCTTTCC GGTCGGTCTG GAACACCCGC TGTTCCTGAT CGCCGGCCCC TGCGTGATCG AAACCGAGCA GCTGGCGCTG GACACCGCCG GCGCTCTCAA GGAAATCACC GACGGTCTGG GCATCCCATT CATCTACAAG TCCTCCTTCG ACAAGGCCAA CCGATCCTCC CACGCAAGCT ACCGGGGGCC TGGCATGGAA GAGGGACTGC GCATCCTGGC CGAGGTCAAA CGCCAGATCG GGGTGCCCGT GCTGACCGAC GTGCACGAGG ACACCCCGTT GCAGGAAGTC GCCTCGGTGG TGGACGTGCT GCAGACCCCG GCCTTCCTGT GCCGCCAGAC CAATTTCATC CAGAACGTCG CCAACACAGG CAAGCCGGTC AACCTCAAGA AAGGCCAGTT CCTGGCACCT TGGGACATGA AGCACGTCGC CGCCAAGGCG CTGGCCACCG GCAACCGGCA TATCATGGTG TGCGAACGCG GGGTCTCCTT CGGTTACAAC AATCTGGTGT CGGACATGCG GTCGCTGAGC ATCATGCGCG AGACCGGCTG CCCGGTGGTC TATGATGCCA CCCACTCGGT GCAATTGCCG GGCGGCCAGG GCACCGCTTC CGGCGGCCAG CGCGAATTCG TGCCGGCACT GGCGCGGGCG GCGGTGGCGG TGGGCATCTC GGGCCTGTTC ATGGAAACCC ACCCCGACCC CGACCGCGCC CTGAGCGACG GTCCCAATTC CTGGCCGCTG GACCGTATGA AGGCTTTGCT GGAGCTGCTG TCGACCCTCG ACCGCACAGT CAAGGCGAGT CCCCTGCTGT AA
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Protein sequence | MSNVETSARP FELCGFPVGL EHPLFLIAGP CVIETEQLAL DTAGALKEIT DGLGIPFIYK SSFDKANRSS HASYRGPGME EGLRILAEVK RQIGVPVLTD VHEDTPLQEV ASVVDVLQTP AFLCRQTNFI QNVANTGKPV NLKKGQFLAP WDMKHVAAKA LATGNRHIMV CERGVSFGYN NLVSDMRSLS IMRETGCPVV YDATHSVQLP GGQGTASGGQ REFVPALARA AVAVGISGLF METHPDPDRA LSDGPNSWPL DRMKALLELL STLDRTVKAS PLL
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