Gene MCA2488 details

Gene Information

• Locus tag: MCA2488
• Symbol: metZ
• ID: 3104467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2669262
• End bp: 2670413
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637171629
• Product: O-succinylhomoserine sulfhydrylase
• Protein accession: YP_114900
• Protein GI: 53803333
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01325] O-succinylhomoserine sulfhydrylase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGACCC GGGCCGTGCG CGCCGGGCAA CGGCGGACGA TGGAGCAGGA GCATGCGGAG 
CCGATCTTCG CCACTTCCAG CTACGTGTTC GCCAGCGCCG CCGAGGCGGC CGAGCGCTTC 
GCCGGCAAGG CGGCGGGCAA CATCTACTCA CGCTTCACGA ATCCCACGGT GCGGACCTTC 
GAGGAGAGGC TGGCGGCGCT GGAGGGCGGG GAGCGCTGCG TCGCGGTCGG CTCCGGTATG 
GCGGCCATTG CCAGTACCGC GTTCGGGTTG CTGAAGGCAG GCGATCACGT GGTGTGTTCG 
CGCAGCGTGT TCGGCAATAC CACCCTGCTG TTCCAGAATT ACCTGGCCAA GTTCGGGGTC 
CCGACGACCT TCGTCGGTCT CACCGATTAC GATGGCTGGG CAGCGGCCAT CCGGCCCGAG 
ACCCGGTTTC TGTTCATCGA GACGCCTTCC AATCCGCTGA CCGAAATCGC CGACATCCCA 
AGGCTCGCGG AAATCGCCCA CTCCCGCGGC TGCCTGCTGG TGGTGGACAA TTGTTTCTGC 
ACCCCGGCCT TGCAGAGGCC GCTGGCGCTG GGTGCGGACA TCGTGATCCA TTCGGCCACC 
AAGTACCTCG ACGGGCAGGG CCGCTGCGTA GGCGGGGCCA TCGTCGGCGG GCGCGAACTG 
CTCGACGCCG AAATCTACCC ATTCCTGCGC ACCGGCGGCC CCAGCATGAG TCCGTTCAAC 
GCCTGGGTGT TCCTCAAGGG ATTGGAAACG CTGAATCTCA GGATGAAAGC CCATTGTGAG 
AACGCACTCG GCCTGGCCCG CTGGTTGGAG GCGCAGCCCT GGGTCGAGCG GGTGCATTAT 
CCGGGACTCG CCAGCCATCC CCAGCATGAA CTCGCCGCCC GCCAGCAATC GGGTTTCGGC 
GGCATCGTCA GCTTCGAGGT CAAGGGCGGA CAGGAGGCTG CCTGGCGTCT GATCGACAGC 
ACCCGGCTGC TGTCGATCAC CGGCAATCTG GGCGATGCCA AAACCACCAT CACCCATCCG 
GCGACTACCA CTCACGGCCG TCTGAGTCCG GAAGCCCGGG CAGCGGCCGG TATCGCCGAC 
GGGCTGATCC GCATCGCGGT TGGACTGGAG AACCTCGCCG ATATTCAGGC CGATCTGGCT 
CGCTTCGCCT GA 

 

Protein sequence

METRAVRAGQ RRTMEQEHAE PIFATSSYVF ASAAEAAERF AGKAAGNIYS RFTNPTVRTF 
EERLAALEGG ERCVAVGSGM AAIASTAFGL LKAGDHVVCS RSVFGNTTLL FQNYLAKFGV 
PTTFVGLTDY DGWAAAIRPE TRFLFIETPS NPLTEIADIP RLAEIAHSRG CLLVVDNCFC 
TPALQRPLAL GADIVIHSAT KYLDGQGRCV GGAIVGGREL LDAEIYPFLR TGGPSMSPFN 
AWVFLKGLET LNLRMKAHCE NALGLARWLE AQPWVERVHY PGLASHPQHE LAARQQSGFG 
GIVSFEVKGG QEAAWRLIDS TRLLSITGNL GDAKTTITHP ATTTHGRLSP EARAAAGIAD 
GLIRIAVGLE NLADIQADLA RFA