| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2487 |
|---|
| Symbol | ugd |
|---|
| ID | 3104468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2667901 |
|---|
| End bp | 2669229 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637171628 |
|---|
| Product | UDP-glucose 6-dehydrogenase |
|---|
| Protein accession | YP_114899 |
|---|
| Protein GI | 53803334 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA CCATCTTTGG TTCCGGCTAT GTGGGATTGG TTACCGGCGC TTGTCTGGCC
GAAGTCGGCA ACGACGTCGT CTGCATCGAC ATCGACGCTG GCAAGATCGA ACGCCTCGAG
CGGGGCGAGG TGCCGATCTA CGAGCCCGGC CTCGATACCA TCATCAAACG CAACATGGTG
GCCGGCCGCT TGCAGTTCAC CACCGATATC GACCTGGGCG TGAGCCACGG CCTGTTCCAG
TTCATCGCCG TCGGCACGCC GCCCGACGAG GACGGCTCGG CCGATCTGCA ATACGTGCTG
GCCGTGGCGC GCAGCATCGG CGAGCGGATG CAGGAATACC GGGTGGTCGT CAACAAGTCC
ACCGTACCGG TGGGAACGGC GGACAAGGTG CGTGGCGCGG TGAGTGAGGT GCTGGCCCGG
CGTGGTGTGG CCATCGAGTT CGACGTGGTC TCCAATCCGG AATTCCTGAA GGAAGGCGCG
GCCATCGAGG ACTTCATGAA GCCGGACCGG ATCGTGGTCG GCACCGATAA CCCGCGCACC
ACGGAACTGC TGCGCGCCCT CTATGCCCCT TTCAACCGTA GCCACGACCG CATGGTGTGC
ATGGACATCC GCTCCGCCGA GCTGACCAAG TATGCCGCCA ATGCCATGCT GGCCACCAAG
ATCAGCTTCA TGAACGAGCT GGCCAACCTC GCCGAGCGGC TGGGCGCAGA TATCGAGAAG
GTCCGGGTCG GTATCGGTTC CGATCCGCGC ATCGGCTACC ATTTCATCTA TCCCGGCTGC
GGTTACGGCG GCTCCTGTTT CCCCAAGGAC GTCAAGGCCC TGGAGCGTAC CGCCCGCGAT
GCCGGTTATC CCGCCCAGTT GCTGCAGGCG GTGGAGGCCG TGAACGACCG CCAGAAGGAA
AAGCTGTTCG AGAAAATCAG CGCCTATTTC GGGGGCGATC TGGCCGGCAA GACCATAGCG
GTCTGGGGAC TGGCCTTCAA GCCGAACACC GACGACATGC GCGAAGCACC CAGCCGCACC
CTGATGGAAG CGCTGTGGCG GGCGGGGGCG AAAGTACGGG CGTTCGATCC CGTGGCGCAG
GAGGAAGCCC ATCGCATCTA TGGCGACCGG GCGGACCTGA TCCTGTGCGA TTCGCCGGAA
TCGGCCCTGC GAGGCGCCGA TGCGCTGGCG GTGGTTACCG AATGGAACGT GTTCCGCAGT
CCCGATTTCG ACGAAATCAA GCAGTCCCTC ACCCGTCCCG CGGTGTTCGA CGGCCGCAAC
ATCTACGATC CAGCACAGAT GAAGGCCAAG GGGTTCGATT ATTTCGCCAT CGGGCGAGGC
TCAGTCTGA
|
|---|
| Protein sequence | MKVTIFGSGY VGLVTGACLA EVGNDVVCID IDAGKIERLE RGEVPIYEPG LDTIIKRNMV
AGRLQFTTDI DLGVSHGLFQ FIAVGTPPDE DGSADLQYVL AVARSIGERM QEYRVVVNKS
TVPVGTADKV RGAVSEVLAR RGVAIEFDVV SNPEFLKEGA AIEDFMKPDR IVVGTDNPRT
TELLRALYAP FNRSHDRMVC MDIRSAELTK YAANAMLATK ISFMNELANL AERLGADIEK
VRVGIGSDPR IGYHFIYPGC GYGGSCFPKD VKALERTARD AGYPAQLLQA VEAVNDRQKE
KLFEKISAYF GGDLAGKTIA VWGLAFKPNT DDMREAPSRT LMEALWRAGA KVRAFDPVAQ
EEAHRIYGDR ADLILCDSPE SALRGADALA VVTEWNVFRS PDFDEIKQSL TRPAVFDGRN
IYDPAQMKAK GFDYFAIGRG SV
|
|---|
| |