| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2304 |
|---|
| Symbol | cobQ |
|---|
| ID | 3103390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2498013 |
|---|
| End bp | 2499530 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637171446 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_114720 |
|---|
| Protein GI | 53803606 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATC GTCTCCCCCG GGGTGCAACA CTGATGATTC AGGGCACGAC GTCCGATGCC
GGCAAGAGCA CGCTGGTGAC CGGTTTGTGC CGGGCCTTGC ATCGCCGCGG TTTCCGCGTC
GCGCCCTTCA AGCCGCAGAA CATGGCGCTC AACAGCGCCG TCACGCCGCA AGGAGGGGAG
ATAGGGCGGG CCCAGGCGGT CCAAGCGCAG GCCTGCGGGC TGCCGCCACA CACCGACATG
AATCCGGTCC TGCTCAAGCC GTACGCCGAT CAAGGCTCGC AAGTGATCAT CCAAGGCCAT
GCCGTGGGCA ACATGGATGC CCGCCGTTAC CATGAATTCA AGCCCACGGC TCTTTCCGCA
GTGCTGGAAT CCTATGCCCG GCTCGCCCAC CAATTTCAGG CGGTCATCGT CGAAGGTGCA
GGCAGCCCGG CGGAAATCAA CCTGCGGACG GGCGACATCG CCAACATGGG ATTCGCCGAG
GCGGTGGACT GCCCGGTGCT TCTCGTCGCC GACATCGACC GCGGCGGTGT GTTCGCCCAC
CTCGTCGGTA CGCTCGAACT CCTTTCGGCC AGCGAACGCG AGCGCATCCG AGGCTTCGTC
ATCAACCGGT TCCGCGGCGA CATGGACCTG TTGCGGCCGG GCATCGAGTG GCTGCAACGG
CGCACTGGCA AGCCGGTGGT GGGGGTTCTG CCCCACCTGG ACGGCCTCTA CCTCGATGCG
GAAGACGCCG TGGTGACGAA GTCGCGGCCC GCCGCGCCCG GCCAGGACAC ACGCTTGAAG
GTCATTGCCC CGAGACTGCC CCGTATCAGC AATCACACAG ACTTCGACGC CTTGCGCTTG
CATCCGCAGG TCGATTTCCG CTTCATCGGT ACGGGCGCGC CCCCCCCGCC CGCCGATCTC
GTCATCCTTC CCGGAAGCAA GAGCGTCCGC GCGGATCTCG CCTGGCTGCG CGAGGCAGGG
TGGGAAGGCG CCATCCGGCG GCATCTGCGC TATGGCGGAA AACTGCTGGG CCTGTGCGGA
GGGTTCCAGA TGCTGGGCCA GGCAATCCAC GATCCCGCGG GACTCGAAGG TCCGCCCGGC
TCCAGCCCCG GCCTGGGACT CCTGGATTTC GAAACGACGC TCGAATTGGA AAAGCAGCTG
CGGACCGTCT CCGGCATCTT GATCTTGGAG GGCGCGACGG TCAGCGGCTA CGAAATCCAT
GCCGGCGTCA GTAGTGGCCC GGCCCTGGAG CGGCCCGCCT GTCGGCTGGA ACGAGGCGCC
GAGGGGGCTC TGTCGGACGA CGGCCAGATC CTGGGCACCT ATGTGCACGG CCTGTTCGAC
GAACCCGAGG CCCTCACCGC CCTGCTCCGC TGGGCCGGCC TGCCGCAACC TCGGGTGTTC
GACGTGAGAT TGGAACGCGA ACGCGGGATC GACCGGGTCG CCGCCGCCGT CGAAGCCGAA
CTGAACATGG AACTGATCAT GGACCTGCTG TCGGGCAGCG GCCGCAGAGA GGGCCACGCG
CCCGCCGGTC AGCCGTAA
|
|---|
| Protein sequence | MSHRLPRGAT LMIQGTTSDA GKSTLVTGLC RALHRRGFRV APFKPQNMAL NSAVTPQGGE
IGRAQAVQAQ ACGLPPHTDM NPVLLKPYAD QGSQVIIQGH AVGNMDARRY HEFKPTALSA
VLESYARLAH QFQAVIVEGA GSPAEINLRT GDIANMGFAE AVDCPVLLVA DIDRGGVFAH
LVGTLELLSA SERERIRGFV INRFRGDMDL LRPGIEWLQR RTGKPVVGVL PHLDGLYLDA
EDAVVTKSRP AAPGQDTRLK VIAPRLPRIS NHTDFDALRL HPQVDFRFIG TGAPPPPADL
VILPGSKSVR ADLAWLREAG WEGAIRRHLR YGGKLLGLCG GFQMLGQAIH DPAGLEGPPG
SSPGLGLLDF ETTLELEKQL RTVSGILILE GATVSGYEIH AGVSSGPALE RPACRLERGA
EGALSDDGQI LGTYVHGLFD EPEALTALLR WAGLPQPRVF DVRLERERGI DRVAAAVEAE
LNMELIMDLL SGSGRREGHA PAGQP
|
|---|
| |