Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2254 |
Symbol | lspA |
ID | 3103164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2444870 |
End bp | 2445346 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637171398 |
Product | signal peptidase II |
Protein accession | YP_114672 |
Protein GI | 53803699 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0126401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGATCGT CCATGTTGAA ATGGCTTTGG CTGTCGGTGC TGGTCTTCGC ACTCGACCAG CTCAGCAAGC AGATCGTCGA CGCATCGATG CGGCTGTATG AGACGATCCC GCTGCTGCCG GTGTTCCAGC TCACCTACCT GCGCAACCAG GGCGCTGCGT TCAGCTTCCT GAGCGAGGCC GGCGGTTGGC AGCGCTGGTT TTTCATCGCC CTGTCGGCCA GCGCCACGCT GCTGATCACC TACTGGCTCA AGCACATGGA CCGGCGGAAA ACCTGGGAAG CCGCCGCCTG GGCCCTGGTG CTGGGCGGTG CCGTCGGCAA CCTGCTGGAC CGGATCGTCT ACGGCTACGT CATCGACTTT CTCGACGTGT TCTACGGCGA CTGGCACTGG CCGGCGTTCA ACGTCGCCGA CTCGGCCATC ACCGTCGGTA TCGGCATGCT GCTGATCGAT TCGTTCCGGG GCCGCGCGAA CGCCTGA
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Protein sequence | MRSSMLKWLW LSVLVFALDQ LSKQIVDASM RLYETIPLLP VFQLTYLRNQ GAAFSFLSEA GGWQRWFFIA LSASATLLIT YWLKHMDRRK TWEAAAWALV LGGAVGNLLD RIVYGYVIDF LDVFYGDWHW PAFNVADSAI TVGIGMLLID SFRGRANA
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