| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2214 |
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| Symbol | kdpD |
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| ID | 3102547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2388746 |
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| End bp | 2391478 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637171360 |
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| Product | sensor histidine kinase KdpD |
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| Protein accession | YP_114634 |
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| Protein GI | 53803483 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.428081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGG AACGTCCGGA CCCGGATGCC CTGCTCGCCA GGGTCGAGCG CGAGCAGGCC
AGAGCGCGGC GGGGCCGGCT CAAGATTTTC TTCGGCGCCG CGGCGGGGGT GGGCAAGACC
TATGCGATGC TGGAGGCGGC CCGGGAGCGG CGCGCCGAGG GTATCGATGT CGTGGTCGGA
CTGGTGGAAA CCCACGGCCG CAAGGAGACC GAGGCCCTCC TCGAAGGACT GGAGATGTTG
CCGGTACGGA CGGTCGAATA CCGCGGAACG GTGGTCGGCG AGTTCGATCT CGACGGCGCG
CTCAAACGCC GGCCCTCCGT GATCCTGGTC GACGAGCTGG CTCACACCAA CACCGCCGGT
TCCCGCCATC CCAAGCGCTG GCAGGACGTG GAAGAGTTGC TGCGTGCCGG CATCGACGTC
TACACCACGC TCAACGTCCA GCACCTCGAG AGTCTCAACG ACGACGTGGG CCAGATTTCC
GGCATCCGGG TGTGGGAAAC CGTGCCGGAC ACGGTGTTCG AAGCGGCGGA TGAAGTCGAA
CTGATCGACT TGCCTCCGGA CGAGCTGCTG GTCCGTCTCA AGGAGGGCAA GGTCTATCTA
CCCCAGCAGG CAGAGCTGGC GGCAGAGAAT TTCTTCCGCA AGGGCAACCT CATCGCGCTG
CGCGAACTGG CCTTGCGCCA GACCGCGGCT CGTGTCGACG CCCAGATGCA GGACTACCGC
GAGGACCACA CCATCCGGGA GGTCTGGCAG GTCGGCGAGC GCATCCTGGT GTGCATCGGC
CCGAACCCGA TGGCGGAACG GCTGATCCGC GCCGGCAAGC GACTGGCGGC CAGCCTCAAG
GCGGAGTGGC TCGTGGTGTA CGTGGAGACC CCGGCGCTGC AGCGCCTCCC GGCGGAGCGG
CGCGATGCAG TGCTGCGCAT GCTGCGGCTG GCGGAACAGC TCGGCGCCGA GACAGTCACC
CTGAGTGCGC CGGACATGAG CGAGGCCATC ATCGATCTCG CCAGGGAACG TAACGTCACC
AAGATCGTGA TGGGCAAACC TCGGCGGCGC GGCTGGAAGC GCTGGCTGCT GGGTTCGGTG
GTGGACACGA TCATTGCCGA GGCTCACAAC ATCAACGTCT ACCTGCTGGG CAGTCCGCCG
GGTGAGGACC GTGGCCAGGA ATCGCTTCAG GCGCCGCAGC CAGGGCTGAG CGCCAAACCG
GACCGCGGCG GTGGGGCGGA GTACCGGGGC TATCTGGGAG CGGCGACGGC GACGTTCCTG
TGTACTCTGA CGGCGAAGGC GATGTTCGGC CGGTTCGAGC TGACCAACCT GGTGATGGTG
TATCTGCTGG GCGTCATCTT CGTGGCGACC CGTTATGGGC GCGGGCCGTC CATCCTCGCT
TCCATCCTGG GCGTCCTCGC CTTCGATTTC TTCTTCGTGG TGCCGTATCA CACCTTTTCC
GTCGCCGACA CCCAGTATTT GTTCACCTTC GCCGTCATGT TCAGCGTTGC TCTGGTGACC
GCCAACCTGA TGGCAAACGT CCGCTCCCAG GCCAAGGTCG CTTCCCATCG GGAACGCCGG
GCGACCGTCC TGTATGCCAT GAGCAAAGAA CTGGCGGCGA GCCGGAGCGA GGCCGAGATC
GTCCGGATCG CGGTGCGCCA GATCGAAACC GAGTTCGGAG GACGCGCCGT GCTGCTGTTC
CCGGACGAAA GCGGAAGGAT CGGCTATCCG GTTTCCCCGC TTGCGGAGGA ATTCTTGCCG
GGCATCGACA TGAGCGTGGC CCAATGGGTG TTCGATCACG ACGAAATGGC CGGCCGGGGT
ACCAATACGC TGCCGGGCGC CAGCGGCGTG TACATCCCTT TGACCGGAGC GGAAAAGACC
ATCGGCGTGC TGGTCATGAA GCCGGTCAAC CTGCGGCGGG TTTTCCTGCC GGAGCAGCAA
AAGCTCCTGC AGACCTTCGT GAACCTGATC GTGCAGGCGA TCGAGCGGGT CCGCCTCGCC
GAACAGGCCC GCATCAACCA GGTGCGGATG GAGTCCGAGC GCCTGCGCAA TTCCCTGCTC
AGCTCGATCT CCCACGATCT GCGCACCCCG CTCGCGACCA TCGTGGGCTC GGCGAGCACC
CTGGTCGAAG GCGACTACGC CCTGGAGCCG GAGGACCGGC GGGAGCTCTG TCGGGCGATC
TACGACGAGT CCCGCCGCAT GGCCAGCCTG GTGAACAATA TCCTGGACAT GGCCTGGTTC
GACGCCGGGG TGGTCAAGCT CCATCTGCAG TGGCACGTTC TGGAGGAAAT CGTCGGCACC
GTGTTGACGC GCTTGAAGAA GCAGCTCGAA CGGCGCCCGG TGACGGTGCG CCTGCCGCGG
GACGCCCCCT TCGTCTACGT GGATTCGGTG ATGCTGGAGC AGGTGCTGGC CAACCTGATG
GAGAATGCCA TCCGCTACAC GCCGGAAAAT AGTCCCATCG AGATTGCCGC CGAGGCCACG
CCGTTCACGA TGACCATCAC GGTTTCCGAC CACGGGCCTG GCATTCCCAA AGGTCAGGAG
GAGCTCATCT TCGAAAAATT CTACCGGGTC CACCGCGAAG GCCCGCAAAG CGGTGTCGGT
CTGGGACTCG CCATCTGCCG TGCCATCGTG GAGGCGCATG GCGGTTACAT CCGCGCCAGG
AACCGGGCCG GCGGTGGAGC GGTATTCACG ATCGTCCTGC CGCTGCGGGA GTCGCCGCCC
CGGATCGAAC CGGAAGCCGA GCCGGCGGAA TAG
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| Protein sequence | MAAERPDPDA LLARVEREQA RARRGRLKIF FGAAAGVGKT YAMLEAARER RAEGIDVVVG
LVETHGRKET EALLEGLEML PVRTVEYRGT VVGEFDLDGA LKRRPSVILV DELAHTNTAG
SRHPKRWQDV EELLRAGIDV YTTLNVQHLE SLNDDVGQIS GIRVWETVPD TVFEAADEVE
LIDLPPDELL VRLKEGKVYL PQQAELAAEN FFRKGNLIAL RELALRQTAA RVDAQMQDYR
EDHTIREVWQ VGERILVCIG PNPMAERLIR AGKRLAASLK AEWLVVYVET PALQRLPAER
RDAVLRMLRL AEQLGAETVT LSAPDMSEAI IDLARERNVT KIVMGKPRRR GWKRWLLGSV
VDTIIAEAHN INVYLLGSPP GEDRGQESLQ APQPGLSAKP DRGGGAEYRG YLGAATATFL
CTLTAKAMFG RFELTNLVMV YLLGVIFVAT RYGRGPSILA SILGVLAFDF FFVVPYHTFS
VADTQYLFTF AVMFSVALVT ANLMANVRSQ AKVASHRERR ATVLYAMSKE LAASRSEAEI
VRIAVRQIET EFGGRAVLLF PDESGRIGYP VSPLAEEFLP GIDMSVAQWV FDHDEMAGRG
TNTLPGASGV YIPLTGAEKT IGVLVMKPVN LRRVFLPEQQ KLLQTFVNLI VQAIERVRLA
EQARINQVRM ESERLRNSLL SSISHDLRTP LATIVGSAST LVEGDYALEP EDRRELCRAI
YDESRRMASL VNNILDMAWF DAGVVKLHLQ WHVLEEIVGT VLTRLKKQLE RRPVTVRLPR
DAPFVYVDSV MLEQVLANLM ENAIRYTPEN SPIEIAAEAT PFTMTITVSD HGPGIPKGQE
ELIFEKFYRV HREGPQSGVG LGLAICRAIV EAHGGYIRAR NRAGGGAVFT IVLPLRESPP
RIEPEAEPAE
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