| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2096 |
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| Symbol | pilB |
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| ID | 3103658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2252675 |
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| End bp | 2254390 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637171250 |
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| Product | type IV pilus assembly protein PilB |
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| Protein accession | YP_114526 |
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| Protein GI | 53803852 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCGG TTTCCGGCGT CCAGCAGCTG AGCGGTCTGG CGAAAAGCCT GGTCAAGGCC
CAGTTGCTTT CGGAGGCGGA CGCCCAGGCG TACTTCGAGG ATGCGCGCAG GAAGAACACC
CCTTTCGTCA GCTATCTCGT TGCCAACAAG ATCCTGGACG GTCTCCAGAT CGCCCAGGTC
GCCCACCAGG AGTTCGGGCT GCCCCTGCTC GATCTGGACG CAGTCGTCTT CGACATTCCC
CCCACGCAGT GGGTCGGCGA GAAGCTGATA CGCCGCCATC ACATCCTGCC CTTGCTGCGA
CGGGGGAATC ATCTCTTCGT CGCGGTCTCG GATCCGACCA ATTTCCTGGG ACTGGATGAA
ATCACTTTCC AGACCCGTCT CGTTACCGAC TGTGTCCTGG TCGAGGAGAA CAAGCTTTCG
CGCTGCATCG AGGCGGTCCT GGATGCGGCG GATACCAGCC TGAAGCAGCT GCTCGAAGAG
GATCTGGACA GTCTGCAGAT CACCGCCGGG GACGACGAAG GCCCGCACGC CGAGCCGGAA
ATCTCCGGTA TCGACGATGC GCCGATCGTG CGCTTCGTCA ACCGCCTTCT GCTGGACGCG
GTGCGGAAGG GGGCCTCGGA CATCCATATC GAGCCTTACG AAAAGTTCCT GCGCATCCGC
TTCCGGCACG ACGGCATCCT GCATGAGGTG GCGAATCCGC CGCCTGCGCT GGGCGTCAAG
ATCTGCGCTC GCATCAAAGT GATGTCGCGC ATGGATATCG CGGAACACCG CATTCCCCAG
GACGGACGCA TCAAGATGAC GCTGTCGCGC TCCCGCGCCA TCGATTTCCG CGTCAATACC
TGTCCGACGC TGTTCGGGGA AAAGATCGTG CTGCGTATCC TCGATCCGAG CTCGGCCCAG
ATCGGCGTCG AAATGCTGGG ATTCGAGCCG GAACAGCGGG ACAATTTCCT GCGTGCGCTG
GAAAAGCCCT ATGGCATGAT CCTGGTTACC GGCCCCACCG GCAGCGGTAA AACCGTTACC
CTCTACACCG GTCTGAACCT CCTCAACCGC GTCGAAGCGA ACATCTCCAC GGTGGAGGAC
CCGGTCGAGA TCACAGTGCC GGGGATCAAC CAGGTCAATG TCAATTACAA GACCGGCCTC
ACTTTCGCCG AGGCGCTGCG GGCGTTTCTG CGCCAGGACC CCGACATCAT CATGGTGGGC
GAGATCCGCG ACCTGGAAAC CGCCGAAATC GCCGTCAAGG CGGCCCAGAC CGGGCATCTG
GTGCTGTCGA CCCTGCACAC CAACGATGCC CCGCAGACCT TGAACCGTCT GATGCAGATG
GGGATCCCCG CGTTCAACAT CGCCTCCTCC GTGCTCCTGA TCATGGCGCA GCGGCTGGCC
CGCCGGCTTT GTCCGCGGTG CAAGCGGGAG GAGAAAGTGC CGCCCGAGGT CCTGCTCGCC
TCCGGCTTCC GGGAGGAAGA CATCGGCAAT TTCACGCTGT TCGGGCCGGC GGGCTGCGAT
CAATGTGTGA AGGGCTACAA GGGGCGGGTC GGCATTTACC AGGTCATGCC GATTTCGGAA
GAAATCAACC GCATCATCCT GGAGGGAGGG AACGTGATGG CCCTGACCGA GCAGGCGCAT
GCGGAAGGTA TCGCGGATCT GAGGGAGTCT GGCTTGAAGA AGGTGAAGGC GGGTATCACC
AGCCTCGAGG AAATCGACCG CGTGACGAGG GACTGA
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| Protein sequence | MAAVSGVQQL SGLAKSLVKA QLLSEADAQA YFEDARRKNT PFVSYLVANK ILDGLQIAQV
AHQEFGLPLL DLDAVVFDIP PTQWVGEKLI RRHHILPLLR RGNHLFVAVS DPTNFLGLDE
ITFQTRLVTD CVLVEENKLS RCIEAVLDAA DTSLKQLLEE DLDSLQITAG DDEGPHAEPE
ISGIDDAPIV RFVNRLLLDA VRKGASDIHI EPYEKFLRIR FRHDGILHEV ANPPPALGVK
ICARIKVMSR MDIAEHRIPQ DGRIKMTLSR SRAIDFRVNT CPTLFGEKIV LRILDPSSAQ
IGVEMLGFEP EQRDNFLRAL EKPYGMILVT GPTGSGKTVT LYTGLNLLNR VEANISTVED
PVEITVPGIN QVNVNYKTGL TFAEALRAFL RQDPDIIMVG EIRDLETAEI AVKAAQTGHL
VLSTLHTNDA PQTLNRLMQM GIPAFNIASS VLLIMAQRLA RRLCPRCKRE EKVPPEVLLA
SGFREEDIGN FTLFGPAGCD QCVKGYKGRV GIYQVMPISE EINRIILEGG NVMALTEQAH
AEGIADLRES GLKKVKAGIT SLEEIDRVTR D
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