| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2085 |
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| Symbol | cpdA |
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| ID | 3104448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 2245019 |
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| End bp | 2245798 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637171239 |
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| Product | cyclic AMP phosphodiesterase |
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| Protein accession | YP_114515 |
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| Protein GI | 53803878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1409] Predicted phosphohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00935961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGACT CCGGAACGCT GTGCCTCCTC CAGCTCACCG ATTCGCACAT CCTGCCCGAC
GCGGAGTCCC GGTTTTACGG CAGTGACAGC GCGGCCAGCC TGGGCGCCGT CATCGACCAT
GCGAACCAGC GCCGCTTCGA CCTGGTCCTG TTCACCGGCG ACCTGGCGCA GGAGCCGGTA
CCGCAAAGCT ACCGGCGGCT CGCCGGGATT TGTGCCGCAC TGCCGGCGCC GTGCCACTGG
CTGCCGGGGA ATCACGACGA ACCCGCGCTC GCCCGCCACG TCCTGGAATC CACGCCGCTG
CTGCACCAAC CCGTGATCCG GCGAGGCCGC TGGCTGATCG TCTGCCTGGA CAGCACCGTA
CCCGGCTCGG CCGGCGGTTC CTTGTCGACG GGGCAGTTCG ACCTGCTGGA ACGGACCCTG
AGCCGCCATC CGTCGCTGCA CACCCTCGTC GCCCTGCATC ACCATCCCGT TCCCTCGGGG
AGCGCCTGGA TGGACACGAT GATCCTGGAC AATGCCGGCG AGTTTTTCGC CGTCCTCCGC
CGGCACCCGC AGGTCAAGGC GGTCGTGCAC GGCCATACGC ATCAGGTCGC GGACGTGGAG
ATCGAGGGAA CGCGGGTGCT CGGGACCCCC TCGACCTGCA TCCAGTTCCG CCCCGCCAGC
CAGACCTTCG CGCTGGATGC GGAACGGCCT GGCTACCGCT GGCTCGAGCT GGGTCCGGAC
GGTTCGGTGG CCACGGGGAT CTGCCGGGTC GCGGTACCGC CGGCATCGGA CACGGCCTGA
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| Protein sequence | MPDSGTLCLL QLTDSHILPD AESRFYGSDS AASLGAVIDH ANQRRFDLVL FTGDLAQEPV
PQSYRRLAGI CAALPAPCHW LPGNHDEPAL ARHVLESTPL LHQPVIRRGR WLIVCLDSTV
PGSAGGSLST GQFDLLERTL SRHPSLHTLV ALHHHPVPSG SAWMDTMILD NAGEFFAVLR
RHPQVKAVVH GHTHQVADVE IEGTRVLGTP STCIQFRPAS QTFALDAERP GYRWLELGPD
GSVATGICRV AVPPASDTA
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