Gene MCA2064 details

Gene Information

• Locus tag: MCA2064
• Symbol: leuD
• ID: 3102443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2220965
• End bp: 2221603
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171218
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_114495
• Protein GI: 53803915
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.851734
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCTT TCAAGAAATT CACTTCGCGA GTCGTGCCGT TGGACCGCGC CAATGTCGAC 
ACCGACGCCA TCATTCCCAA GCAGTTCCTG AAGTCCATCC GCCGCAGCGG GTTCGGTCCC 
TATCTGTTCG ACGAGTGGCG TTACCTGGAC CGTGGCGAGC CCGACATGGA TTGCAGCCAC 
CGTCCGCTCA ACCCGGAGTT CGTGCTCAAC CTGCCCTGTT ACGCCGGCGC CAGGATATTG 
CTGGCCCGCA AGAACTTCGG CTGTGGCTCC TCGCGCGAGC ATGCGCCCTG GGCGCTGGAG 
GATTACGGCT TCCGCGCCAT CATCGCGCCG AGTTTCGCCG ATATCTTCTA CAACAACTGC 
TTCAAGAACG GCATCCTGCC CATCGTGCTC GACGAGGCCA CGGTCGACCG GCTGTTTAGC 
GAGGCCGGGC CCGGCTTCGA GCTCACCGTC GACCTGGAGT CGCAGACCGT GGCGACGCCG 
TTCGGCGAGA CCTTCCATTT CGACGTGGAT GCCTCCCGCA AGCATCGTCT GCTGAACGGC 
CTGGACGACA TCGGTCTGAC CCTTCAGCAT GCCGATGCCA TCCGCGCCTA CGAAGCCGCC 
CGCAGGAAGT CCGCACCCTG GCTGTTTGCC GTCCCTTGA 

 

Protein sequence

MKPFKKFTSR VVPLDRANVD TDAIIPKQFL KSIRRSGFGP YLFDEWRYLD RGEPDMDCSH 
RPLNPEFVLN LPCYAGARIL LARKNFGCGS SREHAPWALE DYGFRAIIAP SFADIFYNNC 
FKNGILPIVL DEATVDRLFS EAGPGFELTV DLESQTVATP FGETFHFDVD ASRKHRLLNG 
LDDIGLTLQH ADAIRAYEAA RRKSAPWLFA VP