| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2059 |
|---|
| Symbol | |
|---|
| ID | 3103857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2214069 |
|---|
| End bp | 2215715 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637171213 |
|---|
| Product | nitrite/sulfite reductase protein |
|---|
| Protein accession | YP_114490 |
|---|
| Protein GI | 53803616 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.155547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAT ACGACCAATA TGACCAGCGG CTGGTCGACG AACGGGTTGC CCAGTTCCGC
AGCCAGACCC GCCGATTTCT CCAGGGCGAA CTGAGCGAGG ACCAGTTCCG TCCCTTGCGA
CTGATGAACG GGCTGTACCT CCAGCGTCAT GCCCCCATGC TGCGCGTCGC CATTCCTTAC
GGCGTGCTCT CGTCCCGGCA GCTGCACAAG CTGGCCGAGA TCGCCCGCCG TTACGACAAA
TCCGTCGCTC ATTTCACCAC CCGCCAGAAC ATCCAGTTCA ACTGGCCACG CCTGGAAGAC
GTGCCGGACA TCCTGGCGGA GTTGGCGACG GTCCAAATGC ACGCCATCCA GACCAGCGGC
AACTGCATCC GCAACGTCAC CAGCGACCCG CTGGCCGGCG TCTGTCCCGA CGAGATCGAA
GACCCCAGGC CCTATTGCGA AATCATCCGG CAGTGGTCGA CCCTGCATCC GGAGTTCAGC
TACCTGCCGC GCAAGTTCAA GATCGCCGTC AGCGGTGCGA GGAAAGACCG CGCCGCGACC
CAGGTACACG ACATCGGCTT GCAGATGGTG GAAAACGAGG CAGGCGAAAC CGGCTTCGAG
GTCCTGGTCG GCGGCGGCCT CGGACGCACC CCGATCATCG GCCAGACCAT CCGCCCCTTC
CTCGCCAAAA CGGATCTCCT CTCCTACCTG GAAGCCATCC TGCGCGTATA CAACCGCTTC
GGGCGGCGCG ACAACAAATA CAAGGCGCGC ATCAAAATCC TGCTCAAAGA GACCGGCATT
GAAGATTTCA CCCGTCGGGT CGAGGCCGAA TGGGTGCAAA TCCGCCAGCA ATTGGTGCTG
GACACCGGCG AGATCGAGCG TGTAAAGAGG CATTTCACGG CGCCCGAGTA CAAGACCGTG
GCCGGTCCCG GCCTGGACGC CCAAGCAGCG GCCGACCCGC GCTTCGCCGT CTGGCTGAGG
AACAACACCA CGCCGCACAA GATCCCCGGT TACCGGGCGG TATTCCTTTC GCTGAAAGCC
CGCGGCGTAC CGCCGGGTGA CATCGCCGAC ACCCAGTTGG ATGCCGTGGC CGACCTCGCG
GAGCGTTACA GCTTCGGCGA GGTCCGCGCC ACCCACACCC AGAACCTGGT GTTCGCGGAT
GTGCATCAGG ACGACCTGCA CGAACTCTGG CAGCGCCTGG ACTCCATCGG CTTGGCGACG
CCCAACATCG GCAAGGCGAC TGACATGATC TGCTGCCCCG GTCTGGATTA TTGCTCGCTG
GCCAATGCCA GTTCGATCTC GGTGGCGGAA GACATCTATT CGCGCATCGA CGATCTCGAC
TATCTGCACG ACCTCGGCGA CCTGCGGATC AACATCTCCG GCTGCATGAA TGGCTGCGCC
CATCAAAGCG TCGGCCACAT CGGCATTCTG GGCGTCGACA AGAAAGGCGA GGAATGGTAC
CAGCTCACGC TCGGCGGCAG CTCCAGCAAT GACGCCTCCC TCGGCGAGCG CCTCGGGCCC
GCCATCGACA AGGCCCACGT GGCCGAAGCC GTGGAAACCA TTCTGCAAAC CTACATCGAG
CTACGTCAGG ACGGGGAATC CTTCCTCGAT ACCGTGCGGC GTCTCGGCAT CAACCCGTTT
CAGGAGCGCG TCTATGCCCA TCATTAA
|
|---|
| Protein sequence | MYQYDQYDQR LVDERVAQFR SQTRRFLQGE LSEDQFRPLR LMNGLYLQRH APMLRVAIPY
GVLSSRQLHK LAEIARRYDK SVAHFTTRQN IQFNWPRLED VPDILAELAT VQMHAIQTSG
NCIRNVTSDP LAGVCPDEIE DPRPYCEIIR QWSTLHPEFS YLPRKFKIAV SGARKDRAAT
QVHDIGLQMV ENEAGETGFE VLVGGGLGRT PIIGQTIRPF LAKTDLLSYL EAILRVYNRF
GRRDNKYKAR IKILLKETGI EDFTRRVEAE WVQIRQQLVL DTGEIERVKR HFTAPEYKTV
AGPGLDAQAA ADPRFAVWLR NNTTPHKIPG YRAVFLSLKA RGVPPGDIAD TQLDAVADLA
ERYSFGEVRA THTQNLVFAD VHQDDLHELW QRLDSIGLAT PNIGKATDMI CCPGLDYCSL
ANASSISVAE DIYSRIDDLD YLHDLGDLRI NISGCMNGCA HQSVGHIGIL GVDKKGEEWY
QLTLGGSSSN DASLGERLGP AIDKAHVAEA VETILQTYIE LRQDGESFLD TVRRLGINPF
QERVYAHH
|
|---|
| |