| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2028 |
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| Symbol | |
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| ID | 3103985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2176844 |
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| End bp | 2178532 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637171183 |
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| Product | membrane-bound lytic murein transglycosylase, putative |
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| Protein accession | YP_114460 |
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| Protein GI | 53803675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TCCCGTTCCG TCCGCGATTG CTTGTCACCG TGTCGCTGGT GGCGCTGCTT
CTTCCCGGCT GTGCCAGCAA GCCGAACAAC CTCAAACCAT CGATGCCAGA GCCCCGGCTG
GGGGTCGCTT CCGAGAATCC CGGCAAACCC AAAAAGGGGA AACAGGCATC GTCGGGTTCC
CAGTACGACA CGTTGTGGGA GCGGATGTTC TCGCTGTATG CCTTGCCCCA GGTTGAACAC
CGCTCGGTGG AGCGTGAGGT CTCGTGGTTC ATCAACCACC CCGATTATTT GAAGCGCGCG
CAAAAGCGCG CTGAACCCTT CTTATATACC ATCGTTCGGC AACTCGAGAA ACAGAAGATG
CCGGGTGAGC TGGCGCTGTT GCCCATCGTC GAAAGTGCAT TCCAGCCTCA CGCGGTTTCT
CCCGCCCGGG CCGCCGGGAT ATGGCAGTTC ATCCCCGAAA CGGGGCGGCG CTATGGTCTG
AAACGGAGCC GCTCGTACGA TGGGCGCCGC GATGTTTATG CGTCGACGCG CGCGGCGATC
AAGTACCTCA AAAAGCTCCA CAACGACTTC AATGGCGACT GGCTTCTGGC GATAGCCGCT
TACAATTGTG GCGAAGGCGC GGTCGCCAAG GCGATTCAGC GCAATGAGGC ACGGAATCTG
CCCACCGACT TCTGGTCGTT GGATCTCCCG GACGAGACGA AGGCCTATGT GCCGCGGTTG
CTGGCCGTGT CGAAGGTTTT CGCGAACGCC GATAAATACG CGATCGATCT CCATTACATT
CCGAACGAAG CCATTTTCAA GCCGGTGAAA GTGAGTTCTC AGCTGGATCT CGCGCTGGCG
GCCGATGCTG CCGACATGAG TCTGGAACGG ATGCTCGAAT TGAATCCCGG CTTCAAACAT
CCGCATGCCG ACATAGAAGG TTCCTACCGT CTTTTTGTAC CAGCGGACAA ATCGCGTAAA
TTCAAGAAGG AGCTGGCCAG GTTGGCGATG AGCGGACAAT TCGATTCCCA TCCCCCCGCT
GATGAGGGGG ACGGAAGTAC CGGCTTCGGG CATCGTGGCT CGCTCGAGAC CGCTACAGAA
GATGACGCCG CTCCGGGGCG CGAACGGTCC GTGCGAAAGC CGGTGGTTTC GGGTTACGGG
GCGGAGTATG CCGTCCCATC CCGCTCTGCC GAACGGGGCG GTCCGGCGAA GGATTCGAGC
CGGAGCGAAC GCTGGCAGAG TGTGGAGACG CCAAGCAGGG GAGGTTCGGC CGTGGTTGCC
CATCTGCGGG ATGGCTCCCG TCTCCGGGAC GTTTGGGGGC GGGAGCATGG GCAGGAGGAC
AAGCCACTGA AAGGAAACCG GCGTCCCGAT GAACGCCTTG GTCTTTCCAG CAAGGCGAAT
CCCAACCGGA AGGAGGGGGG GCGGAAAGTG GCGGGAGGGT CTGCACTTTC CCGGGAGGAG
GCGCTTCGCG AGGAACGGGG CGACCGTGGC AAGGAAAAGC ACGCCATATC GATACCATTC
GACGAGCGAC ATGGCGGCGG GATCAAGGCT TCCCAATCCA TCCGCCATAC CGTGAAACCA
GGCGAAACCC TGTTTGCCAT TTCCCAGCGG TTCGGCGTCA GTGTCGCGGA TCTCCGGAAA
TGGAACGGTG TGAAGGAAAA CAAGCTCGAA GCAGGCAGGA ATATCAGAGT TTCTGCCGGG
AAAGATTGA
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| Protein sequence | MKRFPFRPRL LVTVSLVALL LPGCASKPNN LKPSMPEPRL GVASENPGKP KKGKQASSGS
QYDTLWERMF SLYALPQVEH RSVEREVSWF INHPDYLKRA QKRAEPFLYT IVRQLEKQKM
PGELALLPIV ESAFQPHAVS PARAAGIWQF IPETGRRYGL KRSRSYDGRR DVYASTRAAI
KYLKKLHNDF NGDWLLAIAA YNCGEGAVAK AIQRNEARNL PTDFWSLDLP DETKAYVPRL
LAVSKVFANA DKYAIDLHYI PNEAIFKPVK VSSQLDLALA ADAADMSLER MLELNPGFKH
PHADIEGSYR LFVPADKSRK FKKELARLAM SGQFDSHPPA DEGDGSTGFG HRGSLETATE
DDAAPGRERS VRKPVVSGYG AEYAVPSRSA ERGGPAKDSS RSERWQSVET PSRGGSAVVA
HLRDGSRLRD VWGREHGQED KPLKGNRRPD ERLGLSSKAN PNRKEGGRKV AGGSALSREE
ALREERGDRG KEKHAISIPF DERHGGGIKA SQSIRHTVKP GETLFAISQR FGVSVADLRK
WNGVKENKLE AGRNIRVSAG KD
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