| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1963 |
|---|
| Symbol | hisD |
|---|
| ID | 3102435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2115248 |
|---|
| End bp | 2116558 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637171118 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_114396 |
|---|
| Protein GI | 53803969 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.318488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG TAAAAATCAA ACGGCTTTAC ACCGGCGATG CGGACTTTGC ATCGCAACTG
GACAGGCTGC TTGCCTGGAG CGAAAGCGAG GACACCGACA TCCACCAGCG CGTGACCGAG
ATCATCGGCT GCATCCGCCG CGATGGCGAT GCGGCCCTGG TGGAGCTCAC GGCCCGTTTC
GACCATTTCG TCGTGGATAC CGCTGCGGCG CTCGAGCTGC CGCGTGACGT GCTGGAAGCG
GCCTGGCAGG CGCTGCCCGC CGAACAAGCC AAAGCCCTGC GGGAAGCGGC GGAGCGCATC
CGGGCCTACG CCGAGCGGCA AAAGCTCGAT TCCTGGGACT ACCGTGAAGC CGACGGCACT
TTGCTGGGAC AGAAGATCAC GCCGCTCGAC CGGGTCGGCC TGTATGTACC CGGTGGCAAG
GCCGCATATC CTTCCTCGGT ACTGATGAAT GCGGTTCCTG CCAAGGTGGC GGGCGTGCCG
GAACTCATCA TGGCGGTGCC GGCTCCGCGG GGAGAGCTGA ACGCCCTGGT GCTGGCTGCC
GCCTATATTT CCGGAGTGGA CCGGGTTTTC CGCATCGGTG GCGCACAGGC CGTCGCCGCC
CTGGCTTATG GGACGGAAAC GGTGCCGCGG GTCGACAAGA TCGTCGGCCC CGGTAACATC
TATGTGGCGA CCGCCAAAAA GCTGGTGTTC GGCCAAGTCG GGATCGACAT GGTCGCAGGC
CCCTCGGAGA TCCTGGTGAT CTCGGACGGA CGGACCGACC CGGACTGGAT CGCCATGGAT
CTGTTTTCGC AAGCCGAGCA TGACGAGGAC GCCCAGGCGA TCCTGATCAG CCCGGATGCA
GCCCATCTGG AGGCGGTACA GGCAAGCATC GAGCGGCTGT TGCCCGGCAT GGAGCGCGCC
GAGGTCATCC GCACCTCGCT GGAGCGGCGC GGCGGCATGA TCCTGGTCGA TGATCTGGAG
CAGGCGGCGG CGGTCGCCAA TCGCATCGCG CCGGAACATC TGGAGCTTTC GGTGGAGAGC
CCGGAGGTCC TGGTGGAGTC GATCCGCAAT GCCGGGGCCA TCTTCATGGG GCGCTATACC
GCGGAAGCGC TCGGCGATTA CTGTGCCGGT CCCAACCACG TCCTGCCGAC TTCGGGCACG
GCGCGCTTCT CGTCGCCGCT GGGCGTCTAT GATTTCCAGA AGCGTTCCAG CCTGATCTAC
TGTTCGCCAG ACGGCGCAGA CCAACTGGGC CGTACCGCTT CGCTGCTGGC CTGGGGCGAA
GGGCTGGGGG CGCATGCCCG TTCGGCCGAA TATCGGATCA GGCACCATTA A
|
|---|
| Protein sequence | MTEVKIKRLY TGDADFASQL DRLLAWSESE DTDIHQRVTE IIGCIRRDGD AALVELTARF
DHFVVDTAAA LELPRDVLEA AWQALPAEQA KALREAAERI RAYAERQKLD SWDYREADGT
LLGQKITPLD RVGLYVPGGK AAYPSSVLMN AVPAKVAGVP ELIMAVPAPR GELNALVLAA
AYISGVDRVF RIGGAQAVAA LAYGTETVPR VDKIVGPGNI YVATAKKLVF GQVGIDMVAG
PSEILVISDG RTDPDWIAMD LFSQAEHDED AQAILISPDA AHLEAVQASI ERLLPGMERA
EVIRTSLERR GGMILVDDLE QAAAVANRIA PEHLELSVES PEVLVESIRN AGAIFMGRYT
AEALGDYCAG PNHVLPTSGT ARFSSPLGVY DFQKRSSLIY CSPDGADQLG RTASLLAWGE
GLGAHARSAE YRIRHH
|
|---|
| |