Gene MCA1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1860 
SymbolrecN 
ID3103755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1998017 
End bp1999693 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content65% 
IMG OID637171019 
ProductDNA repair protein RecN 
Protein accessionYP_114297 
Protein GI53803843 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.457848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCA GCCTGAGCAT ACGGGACCTG GCGGTGGTAT CCGCCCTCGA TCTGGACCTC 
CGCCCCGGCT TCACCGTGCT CACAGGCGAG ACCGGGGCCG GCAAGTCCAT CCTGCTCACC
GCTCTGGGAC TGGCACTGGG CGACCGGGCC GACTCCGGTC TGGTACGGCC GGGCGCGGAG
CGGGGCGAAG TCAGCCTCTG CTTCGATCTG GGCGATGCCC CTTCTGCCCG GAACTGGCTC
ATCGACAACG AGCTGGCCGA AGCCGATGAA GATACCTGCG TGATTCGCCG GACCATCGGT
ACGGATGGGC GCTCGCGCGC TTTCATCAAC GGCCGTCCCG CGACCCTCCC GAACCTCCAG
GCGCTGGGAA GGCATCTGGT GGAAATCCAC GGTCAGCACG CTCATCTGAA CCTGCTGCAG
GCTGGCGAAC AGCGGGCCTT GCTGGACCGG CACGCGGGCA GCCGCGAACT GGCCTCGGAG
CTGAAGCGGA TTTTCGAGCG CTGGAAAGAG GTTTCCGAGC GGATCGACCG CCTGCAACAG
GACGCCAGCA GTCGCAACGC GCGCCAGGAA TTGCTCCAGT ACCAGGTGAA CGAACTGGAA
CAACTCGGGA TCGCGGGCCT GGATTACCGT GCACTGTCGG ACGAGCACGA GCTGCTGGCC
AATCTCGGGC GGGTTTCCGA AATCGGTTAC GCGCAGCTCA AGCTGCTTTA CGAGGATGAA
CAGTATTCGG TGAACGGTCT GCTGGCCCAG TCCACACATG CGGTCGGCGA ACTCGCTCAG
CTGTCGAAGG ACTTCGCCGA GATACTGGAG CTGCTGGAAA GCGCCCGCAT ACAGGTCAAA
GAAGCGGCGA TGGCGTTGCG CCATCACCTG GACGCACTCG ATCCCGATCC GGCTAGATTG
GCGGCGCTGG AACAACGGCT GGCGGAAGTC CACCAGCTCG GACGCAAGCA CCAGGTGCGC
CCGGAAGAAC TGCCCGCCCA CCTCGAAACG CTCCGGACCG AATTGCGGAG CCTTGCGACC
GGCGAAGAGC GGCTCGAGCA CCTGCTCGCC GAACGAAGCG AACTGCTGTC CGCCTACGAT
GCCGTCGCCC GCAGCCTCTC GGAAAAGCGG CGGGCAGCAG CCGAGGGGCT GGAGACGGAC
ATCTCTCGGC TCATCCATGA ACTCGGCATG CCGCACGGGC GCTTCGCCGT CGCCTTCGAG
ACGGATACCG AATCGGCGCC CACCCCCCAC GGTCGCGACA GGATCGAATT CCTGGTCAGC
GCCAATCCGG GTCTGCCGCC GCGGCCACTG TCGCGGGTCG CTTCCGGTGG CGAACTCTCC
CGCATCAGCC TGGCGATCGA AGTGGCGTCG ATCGCGCAAA AGACCACGCC TACCCTGATC
TACGACGAGG TAGACACCGG CATCGGCGGC GGCGTGGCCG AGATGGTGGG AACCAAGCTG
CGCTCACTCG GTATCAACCG CCAGGTGCTG TGCGTGACCC ACCTGCCCCA GATCGCGGCC
CTGGGCCATC AGCATCTCCT GGTGGAGAAA CATGCGCAGG ACGGCGTCAC CCAATCCACG
GTACGCCCGC TGAGCATGGA CGAACGCACC GGCGAAATCG CCCGCATGCT CGGCGGCCTG
CGCATCACCG AGCAGACCCT GGCCCATGCG CGAGAAATGC TGGCTTTGGC GCATTGA
 
Protein sequence
MLTSLSIRDL AVVSALDLDL RPGFTVLTGE TGAGKSILLT ALGLALGDRA DSGLVRPGAE 
RGEVSLCFDL GDAPSARNWL IDNELAEADE DTCVIRRTIG TDGRSRAFIN GRPATLPNLQ
ALGRHLVEIH GQHAHLNLLQ AGEQRALLDR HAGSRELASE LKRIFERWKE VSERIDRLQQ
DASSRNARQE LLQYQVNELE QLGIAGLDYR ALSDEHELLA NLGRVSEIGY AQLKLLYEDE
QYSVNGLLAQ STHAVGELAQ LSKDFAEILE LLESARIQVK EAAMALRHHL DALDPDPARL
AALEQRLAEV HQLGRKHQVR PEELPAHLET LRTELRSLAT GEERLEHLLA ERSELLSAYD
AVARSLSEKR RAAAEGLETD ISRLIHELGM PHGRFAVAFE TDTESAPTPH GRDRIEFLVS
ANPGLPPRPL SRVASGGELS RISLAIEVAS IAQKTTPTLI YDEVDTGIGG GVAEMVGTKL
RSLGINRQVL CVTHLPQIAA LGHQHLLVEK HAQDGVTQST VRPLSMDERT GEIARMLGGL
RITEQTLAHA REMLALAH