Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1854 |
Symbol | dapB |
ID | 3105026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1991159 |
End bp | 1991968 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637171013 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_114291 |
Protein GI | 53803857 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.480596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATCA GAACAGGAAT AGCGGGTGTC GCCGGCCGGA TGGGCGGCAA TCTCGTGCGC GCATGCTTAG CCGATCCGGC AGTGGAGCTA ACGGCGGCGA TCGCGCGTCC CGGGAGTCCG GTGGTGGGGC GCGACGCGGG CGAGCTGGCC GGTTTGTCGG CGATCGGTTT GCCCGTGGTC GGCAACCTGA GCGAAGTTTC GGACAAAGTC GATGTACTGA TCGACTTCAC CCTGCCGGAA GTCACGCTGG CCCATCTCGA ATCCTGCCGT TCGGCCGGAA TCCGGCTGGT GATCGGCACG ACCGGTTTCA GCGCGGAGCA GCGCCAGCTC ATAGCCGCCG CCGCGGAGGG CATGGGTATC GTGTTCGCGC CCAACATGAG CGTGGGTGTG AATCTGGCCC TCAAGCTGCT GGATATCGCC GCCCGGGTGG TGGGCGAGCA TGCCGACATC GAGATCGTCG AGGCGCATCA CCGCCATAAG ATCGACGCGC CCTCCGGAAC CGCGCTGCGC ATGGGCGAAG TGGTGGCGAA AGCCTTGGGG CGGAACTTGC AGGACTGCGC GATCTACGGC CGCGAAGGCA TCACCGGGAT ACGCGATGCC AAGACCATCG GTTTCTCCAC CATCCGCGCC GGCGACATCG TCGGCGAGCA CACCGTCATG TTCGCCGACG AAGGCGAGCG CATCGAGATC ACCCATAAGG CCAGCAGCCG CATGACCTTC GCCAAGGGAG CGGTCAGGGC GGCCGTCTGG CTGATGTCCC AAGGCGAAGG ACTGTTCGAC ATGCAGGACG TGCTGGGTTT GAAGGGATGA
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Protein sequence | MVIRTGIAGV AGRMGGNLVR ACLADPAVEL TAAIARPGSP VVGRDAGELA GLSAIGLPVV GNLSEVSDKV DVLIDFTLPE VTLAHLESCR SAGIRLVIGT TGFSAEQRQL IAAAAEGMGI VFAPNMSVGV NLALKLLDIA ARVVGEHADI EIVEAHHRHK IDAPSGTALR MGEVVAKALG RNLQDCAIYG REGITGIRDA KTIGFSTIRA GDIVGEHTVM FADEGERIEI THKASSRMTF AKGAVRAAVW LMSQGEGLFD MQDVLGLKG
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