| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1650 |
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| Symbol | |
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| ID | 3104449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1753427 |
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| End bp | 1755886 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637170812 |
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| Product | sensory box protein |
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| Protein accession | YP_114093 |
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| Protein GI | 53804274 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00487383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCGA TCACGGCATT GAAATCCTCG CTGGGTTACC TGCCCCATGG CTATTGCTAC
GCATGGGTTC CGGAACTGCT CTGGCTGCAC GTGATCTCCG ATCTGGTCAT CGCGGCCGCT
TACTGCGCGA TCTCCATCGC GCTCCTCTAT TTCGCGAAAC GGCGGCGGGA CGTGGTTTTC
CGCAGCGTGT TCCTCCTGTT CGGCCTATTC ATCCTGGCAT GCGCCGGTAC GCACTTCATG
GGAGCCTGGA CGGTCTGGTA CCCCGCCTAC TGGACGGACG GTGCCATCAA GGTCATCACT
GCGGCGGTCT CCTTCGGCAC CGCGATTCTG GTCTGGCCGC TGATACCCCG AGCCCTGGAA
ATTCCGTCTC CCAGACAATT GCTCGAACTT AATCAGCATT TGGCGAGCGA GGTGAGCGAG
CGAAAACAGG CGGAACAACG CCTGCGCATG CTCATCGACG CAGAGCCCGA ATGCGTCAAA
ACGGTGGGCG CCGACGGCAC CCTCCTCGAT ATGAACCGAG CAGGTCTTCA GATGATCGAG
GCCGAATCGA TCGAAGAGGT GCGGGGAAAG CCCATCACAT CGCTCGTCGC TCCCCAGGAC
GTCGAACGGT TCAAGGCTTT CAACCAGCGG GTGCTGGCAG GCGAAAGCGG CATACTGGAA
TTCCAAATCA TCGGCCTCAA GGGCGGCAGA CGCTGGCTGG AAAGCCATGC AGTGCCTTTC
GCCAGCCGCC CCGGCGCCCC CGATGCAGTA CTGGCGGTCA CGCGTGACGT CACCGAACGT
AAACTGGCGG AAGAAGCCGT CCGGTTGGCG GCGACGGCTT TCGAGACCAG CGAAGCCATC
ATGATCACCG ATGCTGCCGG TATCGTACAG CGGGTCAACT CGGGCTATTC CGCGATCACC
GGTTACACCT CCGATGAAAT CGTGGGCACG CCTTCGGAGT TTCTTCACCC TGGCGGAGAG
GAAGGCAAAA CTTCCCCACG GGCGATCCTC GAAGCCTTGA AAGGGACAGA CTGCTGGAAG
GGCGAACTGA CCGCCCGGCG CAAGAATGGC GACGTCTGTC CGGTATGGCT TTCCATCAAG
GCGGTACGTA ACGACGAGCA GATCCTCACC CATTATGTCG TGACCTTCGT TGACATCAGC
GAGCGCAAGC GGGCGCAGCA GGAAATCGAG CAGTTGGCCT ATTTCGATCC TCTGACCGGC
CTGCCGAACC GCCGCTTGTT TCTCGAACGG CTGAATCAGG CCATTGGCGA AAGCTGTGTC
AACGGATCCC GCTGCTCACT GCTGTTCGTC GATCTCGACC GGTTCAAGCA TCTCAACGAT
GCACGCGGCC ACACGGTGGG TGACCAACTG CTGCGCAAAG TCGCCGAGCG CCTGTCCGAG
GGTGTCGGCC GGGGCGGCAT GGTCGCCCGG CTGGGCGGCG ACGAATTCGT GATCCTGCTG
AATGGCCTGG ATGAAGAATT CGAATCCGCC TGCCGACGTA CCATGGATGT TGCGGAAAAT
CTCCGGGTGA TACTGCAACG GCCCTTCGTC CTCTCCAGCG GCCAGCACTA CGTCACCGCG
AGCATCGGTA CCGCCATTTA TCCGTTCGAT ACGGACTCGG CAGACGATCT GCTGAAAGCG
GCGGACATGG CCATGTACGA GGCCAAAGCC TCAGGACGCA ACACGGTGAG GGCTTATGCA
TCGACCATGC AGGCCGCGGC CGAGACCCGT CTGACCCTGG AAAGGGACAT GCATGCGGCG
CTGGAACGCA GGGAGTTCCG CCTCTATCTG CAGTCCCAGG TCGATGGGAA CGGCAGAATC
GTGGGCGCGG AAGCACTGCT GCGCTGGGAG CACCCGACCG AGGGAATACT GTTGCCTGAC
AAGTTCATCG CCCTGGCCGA AGAAACCGGA CTGATTCTGC CGATCGGGGA GTGGGTCTTC
GAACAGGTCT GCCACGAAAA CGTGCGTCTG TCACAGGCGG GACACCGGTT GAGCCTGTCC
GTGAACATCA GCCCCCGCCG CTTCCAGCAA GCTGATTTCC TCGACCACGT CCAGCGGATT
CTGAAACGAA CCGGTGCCAA TCCTCATGAT CTGATCTTCG AAATCACGGA AGGTCTGCTG
GTTTCGGACT TCGACGACGC CATCGCGAAA ATGAGCTTCC TGGAAAGGCT GGGCATCCGG
TTTTCGGTGG ACGACTTCGG TACCGGTTAC TCTTCGCTGG CTTATCTGAA ACGCCTGCCG
CTCAGTGAAC TGAAGATCGC GCAGACCTTT GTCAATGACT TGCCGGATGA CCCCAGCGAT
GTCGCGCTGG TCCAGACCAT CCTGTCGATG GCCTACCATT TGAACCTGGA GACCGTGGCC
GAAGGTGTCG AAACCCGCGC CCAGCTCGAA TTTCTGAAGG CCAGGGGCTG CACGCGCTTT
CAAGGATACT ATTTCAGCCC GCCGCTTCCG GCCACGGAAT TCTTCGAGAA GCTCGCGTGA
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| Protein sequence | MAPITALKSS LGYLPHGYCY AWVPELLWLH VISDLVIAAA YCAISIALLY FAKRRRDVVF
RSVFLLFGLF ILACAGTHFM GAWTVWYPAY WTDGAIKVIT AAVSFGTAIL VWPLIPRALE
IPSPRQLLEL NQHLASEVSE RKQAEQRLRM LIDAEPECVK TVGADGTLLD MNRAGLQMIE
AESIEEVRGK PITSLVAPQD VERFKAFNQR VLAGESGILE FQIIGLKGGR RWLESHAVPF
ASRPGAPDAV LAVTRDVTER KLAEEAVRLA ATAFETSEAI MITDAAGIVQ RVNSGYSAIT
GYTSDEIVGT PSEFLHPGGE EGKTSPRAIL EALKGTDCWK GELTARRKNG DVCPVWLSIK
AVRNDEQILT HYVVTFVDIS ERKRAQQEIE QLAYFDPLTG LPNRRLFLER LNQAIGESCV
NGSRCSLLFV DLDRFKHLND ARGHTVGDQL LRKVAERLSE GVGRGGMVAR LGGDEFVILL
NGLDEEFESA CRRTMDVAEN LRVILQRPFV LSSGQHYVTA SIGTAIYPFD TDSADDLLKA
ADMAMYEAKA SGRNTVRAYA STMQAAAETR LTLERDMHAA LERREFRLYL QSQVDGNGRI
VGAEALLRWE HPTEGILLPD KFIALAEETG LILPIGEWVF EQVCHENVRL SQAGHRLSLS
VNISPRRFQQ ADFLDHVQRI LKRTGANPHD LIFEITEGLL VSDFDDAIAK MSFLERLGIR
FSVDDFGTGY SSLAYLKRLP LSELKIAQTF VNDLPDDPSD VALVQTILSM AYHLNLETVA
EGVETRAQLE FLKARGCTRF QGYYFSPPLP ATEFFEKLA
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