| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1597 |
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| Symbol | |
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| ID | 3102203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1702692 |
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| End bp | 1705859 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170765 |
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| Product | multidrug efflux transporter MexF |
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| Protein accession | YP_114047 |
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| Protein GI | 53804054 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.586106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG CCCATTTCTT CATCGACCGG CCGCGCTTCG CCATCGTCCT CTCCGTCATC
ACGGTGCTGA TCGGCGGGAT CGCGATGTTC GCACTGCCGA TCGCGCAATA TCCAGAAGTG
GTGCCGCCTA CCATCGTGGT ATCGACCACC TATCCGGGCG CCAATCCCAA GGTGATCGCC
GAAACCGTGG CGGCGCCGAT CGAGCAGGAA GTCAACGGCG TCGAGCGCAT GCTGTACATG
TCCTCGCAGT CGACCAGCGA CGGCCAGATG CAGCTCACGA TCACCTTCGA GATCGGCACC
GACATGGACA TCGCCCAGAT GCAGGTGCAG AACCGGGTCT CCAATGCCCT ACCGAAGCTG
CCGGAGGACG TCCGCAGGCA GGGCGTGACG ACCAAGAAAT CTTCGCCCGA CATCCTGCTG
GTCATCCATC TGGTCTCGCC GAACCAGCGC TACGACCAGC TTTATCTCTC CAACTACGCC
CTGCTCAACA TCCGCGACCA GATCCTGCGG CTCCCGGGGG TGGGCGATGT CCGAACCTTC
GGCGCCGGCG ATTACAGTAT GCGGGTCTGG CTCGACCCGA CCCGGATCGC GGCTTTGAAC
ATGACCGCCG GCGATGTGGT GCGCGCCATC CGCGAACAGA ACATCCAGGT GCCGGCCGGC
GTGATCGGGC AGCCGCCGCT GGACGGCAGC CCGGACTTCC AGCTCAACGT CAACACCATG
GGTCGCCTCG CCAGCGTCGA GCAGTTCGGC GCGATCATCG TCAAGTACGG CGAAGGCGGC
AGCCTGGTGC GTCTGCGCGA CGTCGCCAGG ATCGAGCTGG GCGCCAACCG CTACTCCCTG
CGCAGCCAGC TGAACAACGA AGACGCCGTC GCCATGCCGA TTTCGCTGCG GCCGGGCGCC
AACGCCCTGG ATACGGCCCG GCGAATCAAG AGCAAGATGC AGACCCTGAA ACAGCGGTTT
CCGGAAGGAG TGGATTACCG GATCGTCTAC GACACCACGA TCTTCGTCGA GCAATCACTG
GACGCCGTCA CCCGCACCTT TTTCGAGGCG TTGGCCCTGG TGGTGCTGGT GGTGCTGGTG
TTTCTGCAGA CCTGGCGCGC CGCGCTCATC CCGCTGCTGG CGGTGCCGGT GTCCATCGTG
GGGACCTTCG CGGTCATGGC GGCGCTGGGC TATTCGCTGA ACAATCTGTC GCTGTTCGGG
CTGGTACTCG CCATCGGCAT CGTCGTCGAC GACGCCATCG TGGTGGTGGA GAACGTCGAG
CGCCACATCG GCCTCGGGCT TTCGGTCAAG GAAGCGGCGC GCCAGGCCAT GCGGGAGGTG
ACGGGACCGA TCATCGCCAT CTCGGTGGTG CTGGGTGCGG TGTTCATTCC GGCGGCCTTC
GTCTCCGGCA TCAACGGACA GTTCTACCGC CAGTTCGCCG TCACCATCGC CGCTTCCACC
CTGATCTCGG CGTTCAACTC TCTGACCTTG AGCCCCGCGC TCGCCGCGGT CCTGCTCGAG
CCCCACCATG CCCGCAAGGA CCGTTTGAGC CTTTGGATCG ACCGGTTGTT CGGCTGGCTG
TTCCGTGGGT TCAACCGGGG TTTCGATGCC TGCTCCAACG GCTACGCCGG CCTGGTCAAA
CGCCTGCTGA GGCTGTCCGG CGTCGTGCTG GCGCTGTATG GAGGGCTGCT CGCCTTCACC
GGCTACGAAT TCGAGCGGGT GCCTGGCGGG TTCATTCCAC TGCAGGACAA GGGCTATCTG
GTGGTATTTG CCCAGTTGCC GGAGGCCGCC TCTCTGGAAC GAACCGATGC CGTGCTGCAC
AGGGCATCGG AAATCATCCT GGCCCAGCCG GGCGTGCAGG GAACGGTGGC GTTTCCCGGT
TTTTCGGTCG TCAGCGGCGC CAATACCTCG AATGCCGGCA CCATCTTCGT GCCTCTCAAG
CCGTTCGAGG AGCGGGTGGC CAAGGGCCTG TCGGCCCAGC GGATATTGGG CGAATTGCAG
CCCAAGCTCG GCGGCGTGAA GGAGGCTTTC ATCGGCATCT TTCCTCCGCC GCCGATCCTG
GGTCTGGGCA GCCTTGGCGG CTTCAAGCTG CAGATCCAGG ACCGGGGCAA CGAGGGCTTC
GACGCGCTGA ACGGCGCACT GCAAGCCGCC CTCGACGCAG GCCGGCAGAC ACCGGGACTG
GCGGGACTGT TCACCAGTTT CCAAAACAAC GTTCCGCAGC TCTATGTCGA CATCGACCGG
GTCAAAGCCA AGTCGCAGGG CATCCCGCTC TCGGAAATCT TCGACACCAT GCAGATTTAT
CTCGGATCGC TCTATGTCAA CGACCTCAAC CTGTTCGGCC GCACCTACCA GGTCACGGCC
CAGGCCGACG GCGAGTACCG CCGCGAACCC GAGGACATCG GCCGGCTCAA AACCCGCAAC
GCCGCGGGGG CCATGGTACC GCTGGCGGCG CTAATGACAG TGAGGGAAAT CAGCGGGCCG
GAGCGGGTGC TTCGCTACAA TATGTACCCT GCGGCCGAGA TCAACGGCTC TCCCGCGCCC
GGTGTCAGTT CGGGGCAGGC GATCGCTCTG ATGGAGGAGC TGTTGAGGAG GACCCTGCCG
CTGTCCATGG ATTTCGAATG GACCGAGTTG ACCTACCAGC AGATCCTGGC GGGCGACACG
GCCGTCTATG TGTTCGCCCT CTCGAGCCTG CTGGTGTTCC TGGTCCTGGT GGCTTTGTAC
GAAAGCTGGA TACTGCCGCT CGCCATCGTC CTCATCGTGC CCATGACCCT GATGTGCGCT
CTGGGCGGGG TATGGCTGCG GAGCGGAGAC AACAACATCT TCACCCAGAT CGCCTTGCTG
GTGCTGGTCG GCCTGGCGGC CAAGAACGCC ATCCTGATCG TCGAATTCGC CAAGACCCGG
CGGGAAGAAG GGGTGGACGC GATGGCGGCA GCCCTCGAAG CCTGCCGGCT GAGGTTCCGA
CCGATCCTCA TGACTTCGTT CGCGTTTATC ATGGGCGTTT TGCCCCTCAT GTTCGCCACC
GGGGCAGGCG CCGAGATGCG GCAGGCCTTG GGGGTGCCGG TGTTCTTCGG CATGTTGGGC
GTGACGGTGT TCGGCCTGCT GTTCACCCCG GTGTTTTATC ATGTCTTGCA AAGGCTTGCC
GACCGGAGCC GTGGCCATGC CGTTCCAGCG GCCGGCGGGT CCGGATGA
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| Protein sequence | MKFAHFFIDR PRFAIVLSVI TVLIGGIAMF ALPIAQYPEV VPPTIVVSTT YPGANPKVIA
ETVAAPIEQE VNGVERMLYM SSQSTSDGQM QLTITFEIGT DMDIAQMQVQ NRVSNALPKL
PEDVRRQGVT TKKSSPDILL VIHLVSPNQR YDQLYLSNYA LLNIRDQILR LPGVGDVRTF
GAGDYSMRVW LDPTRIAALN MTAGDVVRAI REQNIQVPAG VIGQPPLDGS PDFQLNVNTM
GRLASVEQFG AIIVKYGEGG SLVRLRDVAR IELGANRYSL RSQLNNEDAV AMPISLRPGA
NALDTARRIK SKMQTLKQRF PEGVDYRIVY DTTIFVEQSL DAVTRTFFEA LALVVLVVLV
FLQTWRAALI PLLAVPVSIV GTFAVMAALG YSLNNLSLFG LVLAIGIVVD DAIVVVENVE
RHIGLGLSVK EAARQAMREV TGPIIAISVV LGAVFIPAAF VSGINGQFYR QFAVTIAAST
LISAFNSLTL SPALAAVLLE PHHARKDRLS LWIDRLFGWL FRGFNRGFDA CSNGYAGLVK
RLLRLSGVVL ALYGGLLAFT GYEFERVPGG FIPLQDKGYL VVFAQLPEAA SLERTDAVLH
RASEIILAQP GVQGTVAFPG FSVVSGANTS NAGTIFVPLK PFEERVAKGL SAQRILGELQ
PKLGGVKEAF IGIFPPPPIL GLGSLGGFKL QIQDRGNEGF DALNGALQAA LDAGRQTPGL
AGLFTSFQNN VPQLYVDIDR VKAKSQGIPL SEIFDTMQIY LGSLYVNDLN LFGRTYQVTA
QADGEYRREP EDIGRLKTRN AAGAMVPLAA LMTVREISGP ERVLRYNMYP AAEINGSPAP
GVSSGQAIAL MEELLRRTLP LSMDFEWTEL TYQQILAGDT AVYVFALSSL LVFLVLVALY
ESWILPLAIV LIVPMTLMCA LGGVWLRSGD NNIFTQIALL VLVGLAAKNA ILIVEFAKTR
REEGVDAMAA ALEACRLRFR PILMTSFAFI MGVLPLMFAT GAGAEMRQAL GVPVFFGMLG
VTVFGLLFTP VFYHVLQRLA DRSRGHAVPA AGGSG
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