Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1596 |
Symbol | |
ID | 3102708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1701580 |
End bp | 1702695 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637170764 |
Product | HlyD family multidrug efflux protein |
Protein accession | YP_114046 |
Protein GI | 53804055 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.616153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCA TCGTGGCTGC GATCACTCTG CTCCAAGTCG CCGGCTGTGG CGGCGGCGAA AGCGGCATGG CGGGCCTGCC GACACCGAAG GTGGAGGTGA GCCAGCCGGT GCAGCGGGAA ATCCTCGAAA CGGACGAGTA CACCGGACGG CTGCAGGCGG TGGAATCCGT GGAGGTCCGT GCCCGGGTTT CCGGTTACCT CGAACAAATC CTTTTCGCCG ACGGCAGCCG GGTCAAGAAA GGCGATCTGC TGTTCGTCGT CGACCCCCGG CCCTATGTGG CGCAACTCCA GCAGGCGCAG GCCGGACTCG AGCGGGCCCG ATCGAGGCTC AAGCTGGCCC GGAACCATCT GCAGCGGGCC GAGAGTCCAC TGAAGGAGCA GGCGATTTCG GAAGAGGAAT ACGACACCCG CCGCCAGAGC CTGGTGCAGG CTCTGGCCGA CGTCGAATCG GCCCGGGCGG AGGTCGATCT GGCCCGGCTC AACGTCGAGT TCACCCAGGT CCGCGCGCCC ATCGACGGAC GCATTTCCCG CAAGCTCCTC ACAGCAGGCA ACCTGGTCAC GGCGGATACC ACGGTGCTGG CCGGCATCGT CTCGGTCGAT CCGATGTACG TCTATTTCGA CGCCGACGAA CGCGCCCTGC TCAAGTACCG CCGACTGGAA CTGGCTGGCG AGCGCAAGGA TGGAATGCCG CTTGAAATGG GACTGCTGGA CGAACAGGGT TATCCGCATC GCGGGTATCT CGATTACGTC GATCCGGAGG TCAACGCGGA GATGGGCACC GTGCGTGCCC GCGGTGTCAT CCCCAATCCC GACGGGTTGA TGGAGCAAGG GCTGTTCGCC AGAGTCCGGA TTCCCGGCGG CAGCCGCCAC CAGGGTCTGC TCATCCCCGA CCGCGCGATC GCGATGGATC AGGGCAAGAA GTACGTGATG GTCGTGACCG CCGATAACCG TGCGGAATAC CGCCCCGTTG TGACCGGGCG GCTGTACGAT GGCCTGCGCA TCGTCTCGGA TGGCCTGTTG CCCGAAGACT GGGTCATCGT CAACGGGCTT CAGTTCGTGC GGCCCGGCAC GCCGGTCGAT GCGACCCGCA TCGACATGCC GGAGGCGGCT CGATGA
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Protein sequence | MARIVAAITL LQVAGCGGGE SGMAGLPTPK VEVSQPVQRE ILETDEYTGR LQAVESVEVR ARVSGYLEQI LFADGSRVKK GDLLFVVDPR PYVAQLQQAQ AGLERARSRL KLARNHLQRA ESPLKEQAIS EEEYDTRRQS LVQALADVES ARAEVDLARL NVEFTQVRAP IDGRISRKLL TAGNLVTADT TVLAGIVSVD PMYVYFDADE RALLKYRRLE LAGERKDGMP LEMGLLDEQG YPHRGYLDYV DPEVNAEMGT VRARGVIPNP DGLMEQGLFA RVRIPGGSRH QGLLIPDRAI AMDQGKKYVM VVTADNRAEY RPVVTGRLYD GLRIVSDGLL PEDWVIVNGL QFVRPGTPVD ATRIDMPEAA R
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