Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1592 |
Symbol | rluA |
ID | 3102819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1698383 |
End bp | 1699021 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170760 |
Product | ribosomal large subunit pseudouridine synthase A |
Protein accession | YP_114042 |
Protein GI | 53804068 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGG TGGTTCACAC CGACGCTGCC TTGCTGGTGC TTTCCAAGCC CAGCGGCCTG CTGGCGGTAC CGGGGCGCGG TCAGGACAAA CAGGATTGCC TGAGCGCTCG GGTGCGCGCC CGCTATCCCG ACGCCCTCGT CGTGCACCGG CTCGACATGG CCACTTCGGG CCTGATGGTC ATGGCGCGCG GAATCGCGGT GCAGCGCATC CTCAGCCAGT CCTTCGCCCG GCGGGAAGTG CTCAAGCGCT ACGAAGCGCT CGTGCATGGC GTCCTGGAGA CACCGCCGGA AACAGAGAAC GGCTGGAGCA GCATCGATCT CCCCCTGCTG TCCGACTGGC CCAATCGCCC CTTGCAAAAG GTCGATCCTT TGCACGGCAA ACCCAGCCTG ACCCGCTGGC GAATCCTGGG TCATGAAGAC GGTGCCACCC GCGTGGAACT CGAACCGGTG ACTGGGCGAT CCCACCAGCT CCGGGTCCAT CTTGCCGCCC TGGGATATCC CGTGCTCGGT GATCCGCTGT ATGGGCACGA AGTGGCGAAA TCTCGTGCTG GAAGACTGCT GCTGCATGCC AGGACTTTGG GATTCTTCCA TCCGGTGAGC GGTGAGTGGC TCGAATTCGA AAGCCCGGTG CCGTTTTGA
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Protein sequence | MIEVVHTDAA LLVLSKPSGL LAVPGRGQDK QDCLSARVRA RYPDALVVHR LDMATSGLMV MARGIAVQRI LSQSFARREV LKRYEALVHG VLETPPETEN GWSSIDLPLL SDWPNRPLQK VDPLHGKPSL TRWRILGHED GATRVELEPV TGRSHQLRVH LAALGYPVLG DPLYGHEVAK SRAGRLLLHA RTLGFFHPVS GEWLEFESPV PF
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