Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1545 |
Symbol | metH |
ID | 3104427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1645744 |
End bp | 1649457 |
Gene Length | 3714 bp |
Protein Length | 1237 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170718 |
Product | B12-dependent methionine synthase |
Protein accession | YP_114000 |
Protein GI | 53804149 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.396086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTCC CCGTTACTGC CATGGAGCGT TCGTCGCTCC TAAAACGTCT GCTCAAGGAA CGCATCCTGT TTCTCGATGG CGCCATGGGT ACGATGATTC AACGCTACAA GCTGGCGGAG GCCGACTACC GGGGCCAGCG CTTCGCCGAT TGGCCGCGGG ACCTGAAGGG CAACAACGAC CTCTTGTCGC TGACCCGTCC GGACGTGATC GAGGCCATCC ACTGGGCTTA TCTGGAAGCG GGGGCCGACA TCGTGGAAAC CAACAGCTTC AATGCCACCC GCATCAGCAT GGCGGATTAC GGCATGGAGC CGCTGGTCTA CGAGATCAAC GTGGCTTCGG CCCGGCTGGC CCGGCAGGTG GCGGACCGTA TGAGCCGGCA GACGCCGGAC CGGCCGCGTT TCGTCGCCGG GGTCCTGGGA CCGACCAGCC GGACCGCCTC GATATCGCCC TCGGTCAATG ATCCAGGTTT CCGCAACATC GGCTTCGACG AACTGGTGGC GTCCTACGAC GAGGCCGTAC GCGGCCTGGT CGATGGTGGT GCCGACATCA TTCTGATCGA GACGATCTTC GACACTCTCA ATGCCAAAGC GGCCGTATTC GCCGTCGAGC GGTTCTTCGA GCAAGAGGGC TACACCCTGC CGGTGATGAT CTCCGGCACC ATTACCGATG CCTCGGGCCG CACGCTGTCG GGGCAGACTA CCGAGGCCTT CTGGAATTCA CTGCGCCACG CCAGGCCGAT TTCGATCGGC CTCAATTGCG CACTCGGGGC CAAACAGCTC CGCCAGCACG TCGAGGAACT CTCGCGCATC GCCGACACGT ACGTCTCCGC ACATCCCAAT GCCGGCCTGC CCAACGAGTT CGGCGAATAC GACGAATCAC CCGAAGCGAT GGCCCGCGAG ATCGCCGACT GGGCCGAGCA GGGTTTCCTC AACATCATCG GTGGCTGCTG CGGTACCACG CCGGCACACA TCGAGGCAAT CCACGACGCG GTCCAGCATT TCCCCCCTCG GCGCATCCCG GAGATACCGC CGGCCTGCCG GCTGGCCGGC CTGGAACCCT GCAACATCAC GGCGGGCTCA CTGTTCGTCA ACGTCGGTGA ACGTACCAAC GTGACGGGTT CGGCGGCATT TCGGCGCATG ATCCGGGAGG CGAAGTATGA TGAAGCCCTG GAAGTGGCGC GCCAGCAGGT CGAGAGCGGA GCCCAGATCA TCGACGTCAA CATGGACGAG GGCATGCTCG ATTCGAGGGC AGCGATGGTG CAGTTTCTCA ACCTCATCGC CGCGGAACCC GACATCGCCC GCGTGCCGGT GATGATCGAT TCCTCCAAGT GGGAGATCCT GGAGGCTGGC CTCAAGTGCC TCCAGGGCAA GGGTATCGTC AACTCGATCT CGCTCAAGGA AGGGGAGGCG GCTTTTCTCC ACCATGCCCG GTTGGTGCGG CGTTACGGCG CGGCTGTCAT CGTCATGGCT TTCGACGAAC AGGGCCAGGC CGACACCCGC GAGCGTAAGG TCGAGATCTG CGAGCGGGCT TACCGGCTGC TGACTGAAAA GGCCGGCTTC CCGGCCGAGG ACATCATCTT CGATCCCAAC ATCTTCGCGG TGGCGACCGG CATCGAGGAA CACGACCGCT ATGGTCTCGA TTTCATCGAG GCCGTGGCCG AAATCAAGTC TCGGCTGCCG CATGCGCTGG TCTCGGGGGG GGTGTCGAAC GTCTCCTTCT CGTTCCGCGG CAACGATGCG GTGCGTGAGG CCATCCACGC GGTGTTCCTA TACCACGCCA TTCGCGCGGG GATGGACATG GGGATCGTCA ACGCCGGTCA GCTCGCGATC TACGAGGAAG TGCCGGAGGA ACTGCGCGAC GCCGTGGAGG ACGTCATCCT CGCCCGCCGT GAGGATGCCA CCGAGCGCCT GCTCGCCATT GCCGACCGTT ACCGGGGCGA GGAGGGCGCA GGTAGCGAGC GCAAGGCCGA TATGGCCTGG CGCTCGCTGC CGGTGGACAA GCGCCTGGAA CATGCGCTGG TCAAAGGCAT CGACGAGTTC ATCGAGGTCG ATACGGAAGA AGCGCGCCGG CAGTTCGAAC GGCCGCTGCA CGTCATCGAA GGACCGCTGA TGGCCGGTAT GAACGTGGTC GGCGATTTGT TCGGCGCCGG CAAGATGTTC CTGCCCCAGG TGGTCAAATC GGCGCGGGTG ATGAAGAAGG CCGTGGCCTA TCTGATGCCT TACATGGACG CCGAGAAGGC TGGAACCGAG GTCGGCACCA ACGGCAAAAT CCTCATGGCG ACGGTGAAGG GCGACGTGCA CGACATCGGC AAGAACATCG TCGGCGTGGT GCTCCAGTGC AACGGTTTCG AAGTGATCGA TCTGGGCGTC ATGGTACCCT GCGACAAGAT TTTGCAGACC GCCCGTGAGG AAAACGTCGA CATCATCGGC TTGTCCGGGC TGATCACGCC CTCATTGGAT GAGATGGTCC ATGTCGCCAG GGAAATGGAG CGGCTCGGTT TCGAAATTCC GCTCATGATC GGCGGCGCCA CGACGTCCCG AGCGCACACG GCCGTCAAGA TCGAGCCCAA TTACCATGGG CCGACCGTCT ATGTGACCGA CGCCTCGCGC AGCGTCGGCG TGGCGGGCAG TCTGCTCAGT GCCGACCTGA AGGACGAATT CACGGCCCGG CTGCGCAAGG AATACGAAGA GGTACGGCGG CATCATGCCG GACGCCGCAT CCAGGGTACG TTGCTGAGCC TGCAGCAGGC GCGGGCCAGG GCCTTCCATA CGGACTGGGC GCATTACGTA CCGCCGGCGC CGCATCTGCT GGGTCTGGAA GTGTTCGACG CCTACCCCCT GGAAGAGATC GCCGGATACA TCGACTGGTC ACCGTTCTTC CATACCTGGG AGCTGGCCGG CAGCTATCCA AGGATATTGG ACGACGAGGT GGTAGGGGAA CACGCCCGCA CACTGCTGCA GGATGCCCGT GCCATGCTGG CGCTCTTGAC CGAACAGCGC TGGCTCACCG CTCGTGGCGT GATCGGATTT TTTCCAGCCA ATTCGGAAGG GGATGACGTC GTGCTGTGGA CCGACGAAAG CCGGACCGAG CGGCTGGCGG TGTTGCATCA TCTGCGTCAG CAGCAGGACA AGCCGGGGGG GCAGCCCGCA TACTGTCTGG CGGATTTCGT CGCGCCGGTC GGCAGCGGGG TGGCCGACTA CCTGGGCGGA TTCGCCGTGA CCGTTGGCCA TGGCATCGAG GCGCCGTTGG AGCGGTTCGC CCGGGTCCAT GACGACTACA GCGGCATCAT GCTGAAGGCG CTTGCCGACC GGCTGGCCGA GGCCTTCGCG GAACGGATGC ACCAGCGGGT GCGGCGTGAG TTCTGGGGTT ATGCGCCGGA GGAATCGCTG GACAACGAGG CGCTGATCGC CGAGGCGTAT CGCGGCATCC GGCCGGCCCC GGGTTACCCG GCCTGTCCTG ATCACACCGA GAAGGCCACG CTGTTCCGCC TGTTGGATGC CGAAGCCAAC TCCGGCATTT CACTGACCGA AAGCTTCGCC ATGTATCCGG CTTCCTCGGT CAGCGGCTGG TATTTTTCGC ATGCTTCGGC AAAGTACTTC AACGTCGGTA AGATCGGCCG CGACCAGGTC GAAGATTACG CTCGGCGCAA GGGGATGACG GTACGCGAGG TCGAGCGCTG GCTGGCGTCG AGTCTCGGCT ACGATGCCGA TTGA
|
Protein sequence | MNLPVTAMER SSLLKRLLKE RILFLDGAMG TMIQRYKLAE ADYRGQRFAD WPRDLKGNND LLSLTRPDVI EAIHWAYLEA GADIVETNSF NATRISMADY GMEPLVYEIN VASARLARQV ADRMSRQTPD RPRFVAGVLG PTSRTASISP SVNDPGFRNI GFDELVASYD EAVRGLVDGG ADIILIETIF DTLNAKAAVF AVERFFEQEG YTLPVMISGT ITDASGRTLS GQTTEAFWNS LRHARPISIG LNCALGAKQL RQHVEELSRI ADTYVSAHPN AGLPNEFGEY DESPEAMARE IADWAEQGFL NIIGGCCGTT PAHIEAIHDA VQHFPPRRIP EIPPACRLAG LEPCNITAGS LFVNVGERTN VTGSAAFRRM IREAKYDEAL EVARQQVESG AQIIDVNMDE GMLDSRAAMV QFLNLIAAEP DIARVPVMID SSKWEILEAG LKCLQGKGIV NSISLKEGEA AFLHHARLVR RYGAAVIVMA FDEQGQADTR ERKVEICERA YRLLTEKAGF PAEDIIFDPN IFAVATGIEE HDRYGLDFIE AVAEIKSRLP HALVSGGVSN VSFSFRGNDA VREAIHAVFL YHAIRAGMDM GIVNAGQLAI YEEVPEELRD AVEDVILARR EDATERLLAI ADRYRGEEGA GSERKADMAW RSLPVDKRLE HALVKGIDEF IEVDTEEARR QFERPLHVIE GPLMAGMNVV GDLFGAGKMF LPQVVKSARV MKKAVAYLMP YMDAEKAGTE VGTNGKILMA TVKGDVHDIG KNIVGVVLQC NGFEVIDLGV MVPCDKILQT AREENVDIIG LSGLITPSLD EMVHVAREME RLGFEIPLMI GGATTSRAHT AVKIEPNYHG PTVYVTDASR SVGVAGSLLS ADLKDEFTAR LRKEYEEVRR HHAGRRIQGT LLSLQQARAR AFHTDWAHYV PPAPHLLGLE VFDAYPLEEI AGYIDWSPFF HTWELAGSYP RILDDEVVGE HARTLLQDAR AMLALLTEQR WLTARGVIGF FPANSEGDDV VLWTDESRTE RLAVLHHLRQ QQDKPGGQPA YCLADFVAPV GSGVADYLGG FAVTVGHGIE APLERFARVH DDYSGIMLKA LADRLAEAFA ERMHQRVRRE FWGYAPEESL DNEALIAEAY RGIRPAPGYP ACPDHTEKAT LFRLLDAEAN SGISLTESFA MYPASSVSGW YFSHASAKYF NVGKIGRDQV EDYARRKGMT VREVERWLAS SLGYDAD
|
| |