Gene MCA1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1468 
SymbolmucC 
ID3102843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1559448 
End bp1559888 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID637170643 
Productsigma factor regulator MucC 
Protein accessionYP_113925 
Protein GI53804464 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGG AAGAGGCGAT AGTCACCCAG GTCGAAGAAC ACGCGATCTG GGTGGAAAAG 
TTTCGGAAGT CGGCATGTGG GAGCTGTGCC GGGGGGTGCA GTACTTCCCT GGTGGCAAGG
CTGCTGGGCG GCAAACCCCT GCGCCTCCGG ATCGCTACGG AGGCCCGGGT GGCACCGGGG
GACCGCGTCA TCATCGGGGT GGAAGAAGGC GCCCTCCTCG CCGGTTCATT TCGGATGTAT
CTTTTTCCTC TGTTTTCGCT GATCGGGGGC GCCTTGTTGG GCAAGCTGCT GGCCGCGCAG
GGTCTGTCCG CTACGGCCGA GGCCGGGTCG ATCGCCGGCG GTCTGGTCGG TCTGGGACTG
ACGCTCGTGT TGCTCAAGTA TTGTCCCAGC CTCCAACGGC AGAATCTTCA TCCCGTATTC
ATTCGCCGCA TTTCCCGTTG A
 
Protein sequence
MIEEEAIVTQ VEEHAIWVEK FRKSACGSCA GGCSTSLVAR LLGGKPLRLR IATEARVAPG 
DRVIIGVEEG ALLAGSFRMY LFPLFSLIGG ALLGKLLAAQ GLSATAEAGS IAGGLVGLGL
TLVLLKYCPS LQRQNLHPVF IRRISR