Gene MCA1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1336 
SymbolubiA 
ID3104248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1420722 
End bp1421600 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content63% 
IMG OID637170514 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionYP_113798 
Protein GI53804560 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCC CGCACTCGGT GAAATCGCGT GCCGATGCCT ACTGGCGCCT GATGCGTTTC 
GACAAACCCA TCGGCATCTT CCTGCTGCTC TGGCCTGCTC TGTGGGCGTT GTGGATAGCC
GGGGAGGGGC GCCCCGATCC TGGCGTGGCG GCCGTGATCG TGTTCGGCGT GGTGTTGATG
CGGGCTGCGG GCTGCGTCAT CAACGACTAC GCCGACCGTG AGTTCGACCC GCACGTCGAA
CGCACCCGGC TGCGACCGAT CGCGGCAGGG GAGGTGACGT CGAAAGAGGC TCTCATCCTG
TTCATGGTTC TGTGCCTGAC GGCTTTCGCG CTGGTGCTGA CGATGAACTG GCTGACCATC
GCCCTGTCGG TGCCGGGCGC GTTCCTGGCC GCCTCTTACC CCTTCACCAA ACGCTATACC
CATCTGCCCC AAGCCTACCT CGGCCTGGCC TTCGGCTGGG CCATTCCCAT GACTTTCGCT
GCCCAGACCG GCTCGATTCC GGTCGTGGCC TGGGCACTGT ACGCGGCGAC GGTGCTGTGG
GCACTGATCT ACGACACCAT GTATGCCATG GTGGACCGGG AGGACGATGT AAAGATCGGG
ATCAAGTCGA CCGCGATCCT GTTCGGAAAG TACGACCGCG AGATCATCGG CGCCCTGCAG
ATCGCCATGC TGGCGATTCT GGCCGGCATC GGCCGCTATC TGGGCTTGGG GGGGCTCTAC
GCGCTGGGCC TGGCTGCCGC GGCGGGATTC TCGGTCTATC AGCAGGTCTT GATATTCCGG
CGGGAGAAGT CCAAGTGTTT CCGCGCCTTC CTCAATAATC ATTGGTTCGG TGCGGCGGTA
TTCGCCGGGC TGTTCGCCGA TTACCTCTGG GCCGGATGA
 
Protein sequence
MNVPHSVKSR ADAYWRLMRF DKPIGIFLLL WPALWALWIA GEGRPDPGVA AVIVFGVVLM 
RAAGCVINDY ADREFDPHVE RTRLRPIAAG EVTSKEALIL FMVLCLTAFA LVLTMNWLTI
ALSVPGAFLA ASYPFTKRYT HLPQAYLGLA FGWAIPMTFA AQTGSIPVVA WALYAATVLW
ALIYDTMYAM VDREDDVKIG IKSTAILFGK YDREIIGALQ IAMLAILAGI GRYLGLGGLY
ALGLAAAAGF SVYQQVLIFR REKSKCFRAF LNNHWFGAAV FAGLFADYLW AG