Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1336 |
Symbol | ubiA |
ID | 3104248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1420722 |
End bp | 1421600 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637170514 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_113798 |
Protein GI | 53804560 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTCC CGCACTCGGT GAAATCGCGT GCCGATGCCT ACTGGCGCCT GATGCGTTTC GACAAACCCA TCGGCATCTT CCTGCTGCTC TGGCCTGCTC TGTGGGCGTT GTGGATAGCC GGGGAGGGGC GCCCCGATCC TGGCGTGGCG GCCGTGATCG TGTTCGGCGT GGTGTTGATG CGGGCTGCGG GCTGCGTCAT CAACGACTAC GCCGACCGTG AGTTCGACCC GCACGTCGAA CGCACCCGGC TGCGACCGAT CGCGGCAGGG GAGGTGACGT CGAAAGAGGC TCTCATCCTG TTCATGGTTC TGTGCCTGAC GGCTTTCGCG CTGGTGCTGA CGATGAACTG GCTGACCATC GCCCTGTCGG TGCCGGGCGC GTTCCTGGCC GCCTCTTACC CCTTCACCAA ACGCTATACC CATCTGCCCC AAGCCTACCT CGGCCTGGCC TTCGGCTGGG CCATTCCCAT GACTTTCGCT GCCCAGACCG GCTCGATTCC GGTCGTGGCC TGGGCACTGT ACGCGGCGAC GGTGCTGTGG GCACTGATCT ACGACACCAT GTATGCCATG GTGGACCGGG AGGACGATGT AAAGATCGGG ATCAAGTCGA CCGCGATCCT GTTCGGAAAG TACGACCGCG AGATCATCGG CGCCCTGCAG ATCGCCATGC TGGCGATTCT GGCCGGCATC GGCCGCTATC TGGGCTTGGG GGGGCTCTAC GCGCTGGGCC TGGCTGCCGC GGCGGGATTC TCGGTCTATC AGCAGGTCTT GATATTCCGG CGGGAGAAGT CCAAGTGTTT CCGCGCCTTC CTCAATAATC ATTGGTTCGG TGCGGCGGTA TTCGCCGGGC TGTTCGCCGA TTACCTCTGG GCCGGATGA
|
Protein sequence | MNVPHSVKSR ADAYWRLMRF DKPIGIFLLL WPALWALWIA GEGRPDPGVA AVIVFGVVLM RAAGCVINDY ADREFDPHVE RTRLRPIAAG EVTSKEALIL FMVLCLTAFA LVLTMNWLTI ALSVPGAFLA ASYPFTKRYT HLPQAYLGLA FGWAIPMTFA AQTGSIPVVA WALYAATVLW ALIYDTMYAM VDREDDVKIG IKSTAILFGK YDREIIGALQ IAMLAILAGI GRYLGLGGLY ALGLAAAAGF SVYQQVLIFR REKSKCFRAF LNNHWFGAAV FAGLFADYLW AG
|
| |