Gene MCA1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1325 
Symbol 
ID3102083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1413723 
End bp1414067 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content67% 
IMG OID637170503 
ProductHIT family protein 
Protein accessionYP_113787 
Protein GI53804586 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.684274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAT GTATCTTCTG CCAGATGGTC GCCGGGACGA TCAAACCCGC CGTGGTTCAC 
GAAGACGAAC TGACGCTGGC GTTCCGGGAC ATCAACCCGC AGGCGCCGGT GCATGTGCTG
GTGATTCCCA AGGCGCACGT CGCCAACCTC AACGAGCTGC CGGCGGACGC GCCGGGTCTG
GCCACGGCGC TGTTCGAGAC GGTCAAGCGG GTCGCCGCGC TGGAAGGGAT TGCCGAATCC
GGCTACCGCA CGGTGGTCAA CTGCCTGGGC GATGCCGGCC AGGCAGTCGA CCATCTGCAT
CTACACGTCC TCGGCGGCCG CCGCCTGCAC TGGCCACCGG GCTGA
 
Protein sequence
MSQCIFCQMV AGTIKPAVVH EDELTLAFRD INPQAPVHVL VIPKAHVANL NELPADAPGL 
ATALFETVKR VAALEGIAES GYRTVVNCLG DAGQAVDHLH LHVLGGRRLH WPPG