Gene MCA1320 details

Gene Information

• Locus tag: MCA1320
• Symbol: efp
• ID: 3102067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1410452
• End bp: 1411018
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637170498
• Product: elongation factor P
• Protein accession: YP_113782
• Protein GI: 53804591
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATTG TTAGCACGAG TGAGTTCAAG AACGGTTTGA AAGTGATGCT GGACGGTGAT 
CCCTGCACCA TGCTCGAAAG TGAGTTCGTC AAGCCGGGCA AGGGCCAGGC CTTCAACCGG 
GTCAAATTGC GCAACCTCAA GACCGGCCGG GTGGTGGAAC GGACCTTCAA GTCCGGCGAG 
ACCCTGGAAA CCGCGGACGT GGTCGACGTG GAAATGCAGT ATCTCTACAA CGACGGCGAG 
CTCTGGCATT TCATGGTACC GGAGTCCTTC GAGCAGTACG CCGCTGATCA GAATGCCGTC 
GCCGACGCCA AGAAGTGGCT GAAGGAACAG GACATCTGCA TCCTGACCCT GTTCAACAAC 
GTCCCGCTGG CCGTTCAGCC GCCCAATTTC GTGGAGCTCA CCATTACCGA AACCGACCCC 
GGCGTGCGCG GTGACACCTC TGGTGGCGGC GGCAAACCTG CCACCCTGGA AACCGGCGCC 
GTAGTCCGGG TACCGTTGTT CGTCCAGACC GGCGAGGTCA TCAAAGTGGA CACCCGCACG 
GGGGAATACG TCTCCCGTGT CAAATAG 

 

Protein sequence

MAIVSTSEFK NGLKVMLDGD PCTMLESEFV KPGKGQAFNR VKLRNLKTGR VVERTFKSGE 
TLETADVVDV EMQYLYNDGE LWHFMVPESF EQYAADQNAV ADAKKWLKEQ DICILTLFNN 
VPLAVQPPNF VELTITETDP GVRGDTSGGG GKPATLETGA VVRVPLFVQT GEVIKVDTRT 
GEYVSRVK