| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1277 |
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| Symbol | |
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| ID | 3104798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1360555 |
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| End bp | 1361994 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637170455 |
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| Product | outer membrane protein TolC, putative |
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| Protein accession | YP_113739 |
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| Protein GI | 53804365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.271455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC CCGCGTTTGC CGCTTTATTG CTGTCACTTT TGGCGCCAGC CGCTTCCGCC
GTCGATCTGC TCGGCGTATT CGATCTCGCA CTGCAATACG ATCCCCGTCT GCATGCGGCG
CAGGCCCAGC GCGACGCGGC GCTCGAGAAC AAGCCGCAGG CCGTGGCCCG GCTGCTGCCG
ACGGTGTCCG CCACCACCGG ACTGACCCGA CAGATGGTCC AGACCGGTGA CTCGCCCATC
CTGGTGTTCA ACGCCAAAAA GAACGTCGGT TTCTGGCTGG CGACCGGCAT CGTGCAGCTG
GTGCAGCCTA TCTACCAGCA CGACCTGTGG GTGCGGCTGG CCCAGGCCGA CAATGCGGTG
GCCGAAGCCG AAGCCCTCTA CGCGGCGGAA CTGCAGAGCG TGATGCTACG GGTGACCCAG
ACCTATTTCG AGGTCCTGTA CAAGGAAGCG TCGCTGGACT TCGCCAGGGC CGAACTGGAG
TCGATCAATC GGGAGCTGGA GCAGGCCAAT GCCCGCTTCG AGGTCGGCCT GTCGGCGGTG
ACCGACGTGA ACGAGGCGCA GGCGGCGGCG GACAGGGCGC GGGCGGGCGT CATCATCGCC
GAAAACGAGC TGAACAACGC CCGGGAGCAT CTGCGCCAGA TCGTGGGTGA CGATCCGGGC
GAGCTGGAAC CGCTGAAGCT CGAAGTGCCG TTGGAAGATC CAATGCCGGA CGACATCGAG
CGCTGGAACG ACACCGCCCA GCAGAGTGCG CTGACCATCA TCGCCGCGAC CAACCGGGCA
GACCGGGCCA AACAGGAAAT CGAGGTGCAG TTCGCCGGGC ACTATCCTTC GATCAACCTG
ATCGCCGATG CCCAGTTCTA TGACAATGAC CGGCCGCCCC GCCCCAACCG CTACCAGCAG
CAGGACGTGG GCATGCAGAT CAACGTGCCG CTGTTCGCGG GCGGCGGGGT CAATTCCCGG
GTCCGGCAGG CGCGCTTCGG CTTCGAAGCC GCCATCCAGC AGCTGGACCA GGAGCGCCGC
GCGGTACGCA CCAGGGTGAA GAATGCCTAT CGGGCCATCC GCTCCGCCAT CGGCCAGGCC
AAGGCCTTCA AAACCGCGAT CAAATCGTCG GAAAGCGCAC TGGAGGCCGC CATCGCCGGC
ATGGAGGTCG GCACCCGCAC CATGACGGAC GTGCTGTTCG TACAGCGCCA GTATTACCAG
AACAAACGCG ACTTCGCCCT GGCCCTGCGC GACTACATCG TCAACAGCGT CGCGCTGAAG
GAAGCCGCCA GCGTCATGCA GCGCGAGGAC CTGGACCGGA TCAACGGCTG GCTACAGGCC
CCGCCCGCAG CGCCGGCGAA GGACGGGACC GGAGCCGCGC CCATGCAACC GGGATCCGGG
CCGGTCCGCA AGGCCGGCCG AGGCGCCCCG GCGCCAAGCG CTCCGAATCT TCACCGCTGA
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| Protein sequence | MNKPAFAALL LSLLAPAASA VDLLGVFDLA LQYDPRLHAA QAQRDAALEN KPQAVARLLP
TVSATTGLTR QMVQTGDSPI LVFNAKKNVG FWLATGIVQL VQPIYQHDLW VRLAQADNAV
AEAEALYAAE LQSVMLRVTQ TYFEVLYKEA SLDFARAELE SINRELEQAN ARFEVGLSAV
TDVNEAQAAA DRARAGVIIA ENELNNAREH LRQIVGDDPG ELEPLKLEVP LEDPMPDDIE
RWNDTAQQSA LTIIAATNRA DRAKQEIEVQ FAGHYPSINL IADAQFYDND RPPRPNRYQQ
QDVGMQINVP LFAGGGVNSR VRQARFGFEA AIQQLDQERR AVRTRVKNAY RAIRSAIGQA
KAFKTAIKSS ESALEAAIAG MEVGTRTMTD VLFVQRQYYQ NKRDFALALR DYIVNSVALK
EAASVMQRED LDRINGWLQA PPAAPAKDGT GAAPMQPGSG PVRKAGRGAP APSAPNLHR
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