Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1264 |
Symbol | |
ID | 3103597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1346677 |
End bp | 1348842 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637170443 |
Product | peptide ABC transporter, periplasmic peptide-binding protein, putative |
Protein accession | YP_113727 |
Protein GI | 53804384 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00386395 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTACCG GATCGAACCA ACTCGGGCTT TACCTGACGC TGTTCGCGGC CCTGGGGCTG GCGGGCTGCG AGGGACCGCT CAACAGTCCT TACCCTGCGG CCGATGCCGA GCGCAACATC CTGTATTCCT CGTTTTCCGA ACGCCCCAAG CACCTCGATC CGGCCCGCGC CTACAGTTCC GACGAGAGCC TCATCCTCGG CCAGATCTAC GAGCCGCTGC TGCAGTATCA CTACCTCAAG CGCCCCTATG TCCTGGAGCC GGCGACCGCC GAGGCGCTTC CGGAGATCCG CTATCTCGAT GCCGGCGGCC GGGTCCTGCC GCCCGGTACG CCGGATTCGG CCATCGCCTA CAGCGAGTAT GACTTCCGTC TGAAACGCGG CATCCGCTTC CAGCCGCATC CGGCTTTCGC CCGCGGTGTG GGAGGCGAGT ATCTTTATCA TCATCTGGGC CCCGAGCAGC TGGCCCGCAT CCAAACCCTG GCGGATTTCT CCGAAACCGG CACCCGCGAA CTGACGGCGG AGGATTACGC CTACCAGATC AAACGCCTGC TGCATCCGGC GCTGCATTCG CCGATCGCTG AGCTGATGAA GGAGCACATC GTCGGCTTCA AGGCGTTGGG CGACACTCTG GAGCGGGATT ATTTCGCGGC TCCCAAGGGG CAATTCTTCG ATCTGCGGAG GTATGCCCTG GAGGGCGTCC AGGTTCCCGA CCCGCACCGG CTGGTCATCC GTCTGAACGG CAAGTATCCA CAGTTCCGCT TCTGGCTGGC GATGAGCTTT TTTGCCCCCA TGCCCTGGGA AGCCGATGCG TTTTATGCCC AGCCGGGGTT GATCGAGAAA AACATCACGC TGGACTGGTA TCCGGTGGGC TCGGGGCCCT ATATGCTGGC GGAGAACAAC CCCAATCGCC GCATGGTGCT GGAGCGTAAT CCGTACTTTC ACGAGGACCG CTACCCGGCC GAGGGCGATC CCGAAGACGC GCCGGCCGGT CTGCTGGCCG ACGCGGGTAG GCTGCTGCCG TTGGTGGACC GGGTGGTCAT GGTTCTGGAA AAGGAAACGA TCCCTTATTG GAACAAATTC CTGCAAGGTT ATTACGATTA TTCCGGCATT GCTTCGGACA ATTTCGACCA GGCGGTGCAG GTCGGCAGCT CGGGCAGTCC GGAGCTGACA CCGGAAATGC TGGAGAAGGG CATCCGGCTG GAGACCTCGG TCGCGGCATC GGATTACTAC CTCGGATTCA ACCTGCGCGA CCCGGTGGTC GGCGGGCTGG ACGAAGCGCA CTGCAAGCTG CGCCAGGCGC TCAGCATCGC CATGGATTAC GAGGAATTCA TCGCCATCTT CATGAACGGC CGGGGGGTGC CGGCGCAAGG CGTGCTGCCG CCGGGCATCT ACGGCTACCG GGAAGGGGAG AAGGGGATCA ATCCTTATGT CTACGATTGG GTGGACGGGG CGCCCCGGCG CAAAAGCATC GAAACCGCCC GCCGTCTGCT CGCGGAGGCA GGTTACCCCA ACGGCGTCGA TGCCGTGACC GGTAAGCCGC TGGTGCTGTA CCTCGATCTT TCGACCCATG GGGCGGACGA CAAGCCACTG CTGGCCTGGT ACCGCAAGCA ATTGGAGAAG CTCGGCGTCC AACTGGTGTT TCGTGCCACC GACTACAACC AGTTCCAGCA AAAGATGGCG GCCGGTAACG CCCAGATCTA CCAGTGGGGC TGGAATGCCG ATTATCCCGA TCCGGAGAAT TTCTTCTTTC TGCTGTACGG GCGCAATGCC AAGGTACCGA ATGGCGGCGA GAATACCTCG AACTATGTGA GCGAAGAATT CGACCGCTTG TTCGAGCGGA TGCGCAACCT GGACGACGGT CCGGAGCGTC TGGCGGTGAT CGATGCCCTG CAGGAAAAGG TCCGGCACGA TGCCCCTTGG ATTTTCGGGC TGCATCCCAA GGGTTTCTCG TTGCATCATG CCTGGTACGG TAACCTCAAG CCCAACCTGA TGGCCAACAA CAAACTCAAG TACCTGAAGA TCGACGCGCG GCAGCGCGCG GCTCGTCGCG CCGAGTGGAA CCGGCCGGTC TGGTGGCCAC TGCTGGCGGG GTTGGCGCTG CTGCTCGCGG CCGTCGTTCC GGCCTATCGC AGCTACCGTC ACAGGCTGAG GGCCGCGGCT TTATGA
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Protein sequence | MSTGSNQLGL YLTLFAALGL AGCEGPLNSP YPAADAERNI LYSSFSERPK HLDPARAYSS DESLILGQIY EPLLQYHYLK RPYVLEPATA EALPEIRYLD AGGRVLPPGT PDSAIAYSEY DFRLKRGIRF QPHPAFARGV GGEYLYHHLG PEQLARIQTL ADFSETGTRE LTAEDYAYQI KRLLHPALHS PIAELMKEHI VGFKALGDTL ERDYFAAPKG QFFDLRRYAL EGVQVPDPHR LVIRLNGKYP QFRFWLAMSF FAPMPWEADA FYAQPGLIEK NITLDWYPVG SGPYMLAENN PNRRMVLERN PYFHEDRYPA EGDPEDAPAG LLADAGRLLP LVDRVVMVLE KETIPYWNKF LQGYYDYSGI ASDNFDQAVQ VGSSGSPELT PEMLEKGIRL ETSVAASDYY LGFNLRDPVV GGLDEAHCKL RQALSIAMDY EEFIAIFMNG RGVPAQGVLP PGIYGYREGE KGINPYVYDW VDGAPRRKSI ETARRLLAEA GYPNGVDAVT GKPLVLYLDL STHGADDKPL LAWYRKQLEK LGVQLVFRAT DYNQFQQKMA AGNAQIYQWG WNADYPDPEN FFFLLYGRNA KVPNGGENTS NYVSEEFDRL FERMRNLDDG PERLAVIDAL QEKVRHDAPW IFGLHPKGFS LHHAWYGNLK PNLMANNKLK YLKIDARQRA ARRAEWNRPV WWPLLAGLAL LLAAVVPAYR SYRHRLRAAA L
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