Gene MCA1230 details

Gene Information

• Locus tag: MCA1230
• ID: 3102774
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1296548
• End bp: 1297195
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170408
• Product: OmpA family protein
• Protein accession: YP_113694
• Protein GI: 53804447
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.337438
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGG CCATAGATAG ATCTCGAGAT TTCGGAAGGG TAGGCATTAT GAATCGCATG 
AGAACGGGTT TGTTGATAGT GGTTGCGGCA TCGCTGCTGA CAGCGGGATG CTCCAAGAAG 
GAAGAAGTGA GGCCTGACGA TGCGGCCGGC GTGGGGCTCG AGGGCGGCGG CGGTCCGGGC 
GGGCCCCAGA TCGGCAAGTA CGGCGCGGGC GGGAACGGCG GCAAGGCGTA TGGCGGTACA 
GGCGGTGCTT ATGGCGGTGG GGCGTATGGC AGTGGCGGGG GCGATCCCGC GTTGAACGAT 
CCTTCCAGCC CGCTCTATAA GCGGGTGATT TATTTCGGCT ATGACAGCAG CGAGGTCCTG 
CCCGAGTACG TGCCGATCGT CAACGCGCAC GCCGCTTATC TGGCATCGCA TCCCAATGTC 
ACGGTGACGC TGGAAGGGCA TTGCGACGAA CGCGGCTCGC CCGAATACAA CATCGCTCTG 
GGCGAACAGC GGGCGCGCTC GATCGCCAAC ACCATGCGCT TTCAGGGGGC GAGCGACGGT 
CAGATGCAGA TCGTGAGTTT CGGCGAGGAG AAACCCGCGG ACCCGGGCAG CGGAGAAGCG 
GCCTGGGCCA AGAATCGCCG AGTCGAGATA GTCTACCCGG GAAACTGA 

 

Protein sequence

MAEAIDRSRD FGRVGIMNRM RTGLLIVVAA SLLTAGCSKK EEVRPDDAAG VGLEGGGGPG 
GPQIGKYGAG GNGGKAYGGT GGAYGGGAYG SGGGDPALND PSSPLYKRVI YFGYDSSEVL 
PEYVPIVNAH AAYLASHPNV TVTLEGHCDE RGSPEYNIAL GEQRARSIAN TMRFQGASDG 
QMQIVSFGEE KPADPGSGEA AWAKNRRVEI VYPGN