| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1229 |
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| Symbol | tolB |
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| ID | 3103943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1295268 |
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| End bp | 1296542 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637170407 |
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| Product | translocation protein TolB |
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| Protein accession | YP_113693 |
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| Protein GI | 53804448 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.910184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGG CGCGTGCGAT CGCCCGTTGG ATCTCGTTCC TGTTGCTCAT CGCCGCGGGT
CAGGTCTGTG CGGAACTCCA GGTTCAGATC AGCCAAGGGG TGGAAGGGGC GATTCCGGTG
GCCGTCGTTC CCTTCGCCAA CCAGGGAAGC TTGAGCGACT CTCTCAGCCA GATCGTGTCG
GCCGACCTGC AGCGCAGCGG GCGATTCAGA ACCTTGGCGG AAAGCGCCAT GCAGGAGCGG
CCGACGGCGC CGGACCAGGT TCAGCAGGCG GCATGGCAGG CTTTGGGCCA GGATTTCGTC
GTGGTGGGCC AAATCCGGCC GTCCGGCGAC GGCTACGAAG CCGATTTCCA TGTCGTCGAC
GTCATCCGTG GCACGCTGGT CGTCAGCTAC AGATTGCCCT TCGGAAGAGC CGAAACCCGC
CAAGCCGCCC ATCGGATCGC CGACGTCATC TATAAGGCCA TCACCGGTGA GCCCGGCGCG
TTCGCCACGC GCGTCGCTTA TGTCAGCGTG TCGGGTGAGG GCGCCAACCG GCGCTACAAC
CTGCAGGTGG CGGACACGGA CGGCTACAAC CCGCAGAGCG TCATCGTCTC GAACGAGCCG
ATTATGTCGC CGGCCTGGTC GCCCGACGGT ACCAAGATCG CCTACGTTTC GTTCGAAAGC
CGCAGGTCGG CGATCTACGT TCAGACGCTG GCTACCGGCG AGCGCCGCAA GGTGTCGGAT
GCTCCGGGTA TCAACGGCGC GCCGGCGTTC TCGCCGGACG GATCGCGGCT GGCGCTGACC
TTGTCGAAAG ACGGCAATCC CGATATCTAC GTCATGAACC TGGGATCGGG CGGGCTCACC
AGGATCACCG ATTACAGCGG GATCGACACC GAACCGAACT GGTCACGGGA CGGCCGTTCC
ATCGTGTTCA CTTCCGATCG CGGTGGCAAA CCCCAGCTGT ATCTGGTGTC GGCAAGCGGG
GGACCGGCCG AACGGCTGAC GTACGAAGGG GATTACAATG CCCGCGGTGT GTTCTCGCCG
GATGGTCGCA GCCTCGCCAT GGTGCACGGC AAGGGCGGCG ATTACCGGAT CGCAGTCATG
GATCTGGCCA GCCGTGCGGT TCGGGTTTTG ACCAGCGGTC CTTTGGACGA ATCCCCGGGC
TTCGCTCCCA ACGGCAGCAT GATTTTGTAC GCGGCGCGCC GGGGCCAGCT GGCGGCGGTT
TCCATCGACG GCAAGGTCCG TCAGAGTCTG CGGATCGAGG GGGGCGCCGT GCGGGAGCCC
GCGTGGTCGC CTTGA
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| Protein sequence | MNKARAIARW ISFLLLIAAG QVCAELQVQI SQGVEGAIPV AVVPFANQGS LSDSLSQIVS
ADLQRSGRFR TLAESAMQER PTAPDQVQQA AWQALGQDFV VVGQIRPSGD GYEADFHVVD
VIRGTLVVSY RLPFGRAETR QAAHRIADVI YKAITGEPGA FATRVAYVSV SGEGANRRYN
LQVADTDGYN PQSVIVSNEP IMSPAWSPDG TKIAYVSFES RRSAIYVQTL ATGERRKVSD
APGINGAPAF SPDGSRLALT LSKDGNPDIY VMNLGSGGLT RITDYSGIDT EPNWSRDGRS
IVFTSDRGGK PQLYLVSASG GPAERLTYEG DYNARGVFSP DGRSLAMVHG KGGDYRIAVM
DLASRAVRVL TSGPLDESPG FAPNGSMILY AARRGQLAAV SIDGKVRQSL RIEGGAVREP
AWSP
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