Gene MCA1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1178 
Symbol 
ID3105008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1232830 
End bp1234413 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content62% 
IMG OID637170359 
Productexopolysaccharide export protein, putative, interruption-C 
Protein accessionYP_113644 
Protein GI53804709 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.704775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCAGA AGCTGGCCGA GTCCGAACGC CGCCTGCAAG CGTATCTCGA GAACCAGAAA 
CTCGTGGACA TCGGGAACGC TTCGTCTTCA GGGGGAGCGT CTTCGGGGGT GTCGTCCCTG
AGCGCCAGCC AGTTGAGCGA CTTGAATGCG AAGTACGTCG AAGCCAGAAA GGCGCGTCTG
GAAGCAGAAA CGGCTTACGG TCAGATCGCC GGCCTTGGCG GCCAGGTGCC CGACAACATC
GAAAGCATGC CGGCGATCTA CGGCGACGAA ACGGTGCGCG ATCTCAAGCA GCAGGAACAC
GAGGCGCTGA CGCGCGTCAA CGAGTTGTCC AGCCGCTACG GCGCGCAGCA TCCGGAGCGG
GTGACCGCGG AGACCCATCT CGAATCGGTA CGAACCGCGT TGAAGAAGCA GATCGCCAGC
GTGGCCGCCC GGCTGAAGCA GCAGATCGCG GTCGCGTATG CCAACGAGAA TGCGCTGGCC
GGCCAGATCG ACGGGCTCAA GAACGAATTG CAGGGGATTG CCAGGAAAGA AAGCGTATAT
CGCGAATTGC AGCGGGAGGT GCAGTCCAAC CGCGAGCTTT ACGAGATGTT TTTCAAGCGC
CTCAAGGAAA CTTCCGAGGC GGGCGACCTG CAGCCCTCCA ATGCCCGCAT CATGGACGCC
GCGATTCTGC CCAGGGTGCC GGTGAAGCCG AACAAGAAAC TGGGCGTGAC CATCGCTTTT
TTCCTTTCTC TGATGGCCGG AATCGGCCTC GCCTTCCTGC TCGATTTCAT GGACAAGTCG
TTCCGGAGTT CGGGCGAGAT GGAGCAGAAG CTGGGGCTCC CCTTGCTGGG CCTGGTGCCC
CTGGTGACCC AGAAGCAGAA GCGAGGCGTC AAGGAAGATG TGTCAAAGGT CTTCCTGGAA
GATCCGCGCG GCAGTTTCGC GGAATCGGTG CGCACGATTC GCACCGGCAT CATGCTTTCC
GCGCTGGACG ATCCGCGCAT GAGCATCCTG GTGACGTCCT CGCTGCCGGG CGAAGGGAAG
TCGTCGATTT CGATGAGCCT GGCCTATGCC CTGGCCCAGC TCAATTCCAG GGTGCTGGTC
GTGGAGGCGG ATCTGAGGCG GCCCAATCTG GCCAAGCGCT GCGGCCTGTC CGCGAAGATG
CCCGGTCTTT CGAACCTGGT GGTGCAGACG GCGACCCTGG AGGAGTGCAT CCACCATTAC
GACGCGGGCA ACATCGATCT GATGCCGGCC GGGATCATTC CGCCGAATCC GCTCGAGCTG
CTGTCTTCCC ACCGCTTCGC CGAAGCGATG GCCGCACTCG AGAGCGAGTA CGACGCGATC
ATCCTCGACG CGCCGCCGAT GCAGCCGGTG AGCGATGCGC TGGCACTGTC CCGGCTGGTC
CGGTCGGTGA TCTACGTGGT CCAGGCGGAA AAAACGCCGG TGCACATGGC GCGTTCGGGC
ATCGACCGGC TGCGCAAGGT TCGTGCGCCG CTGACCGGCG TGGTCCTGAG CCAGTTGAAC
CTGGAAAAAA GCCGGCGCGG CTACAGCAGC TATTACTACA GCGACTATTA TTATGGGAGT
TACAAGCAGG AAGGCGCCCA GTAA
 
Protein sequence
MRQKLAESER RLQAYLENQK LVDIGNASSS GGASSGVSSL SASQLSDLNA KYVEARKARL 
EAETAYGQIA GLGGQVPDNI ESMPAIYGDE TVRDLKQQEH EALTRVNELS SRYGAQHPER
VTAETHLESV RTALKKQIAS VAARLKQQIA VAYANENALA GQIDGLKNEL QGIARKESVY
RELQREVQSN RELYEMFFKR LKETSEAGDL QPSNARIMDA AILPRVPVKP NKKLGVTIAF
FLSLMAGIGL AFLLDFMDKS FRSSGEMEQK LGLPLLGLVP LVTQKQKRGV KEDVSKVFLE
DPRGSFAESV RTIRTGIMLS ALDDPRMSIL VTSSLPGEGK SSISMSLAYA LAQLNSRVLV
VEADLRRPNL AKRCGLSAKM PGLSNLVVQT ATLEECIHHY DAGNIDLMPA GIIPPNPLEL
LSSHRFAEAM AALESEYDAI ILDAPPMQPV SDALALSRLV RSVIYVVQAE KTPVHMARSG
IDRLRKVRAP LTGVVLSQLN LEKSRRGYSS YYYSDYYYGS YKQEGAQ