Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1178 |
Symbol | |
ID | 3105008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1232830 |
End bp | 1234413 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637170359 |
Product | exopolysaccharide export protein, putative, interruption-C |
Protein accession | YP_113644 |
Protein GI | 53804709 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.704775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGCAGA AGCTGGCCGA GTCCGAACGC CGCCTGCAAG CGTATCTCGA GAACCAGAAA CTCGTGGACA TCGGGAACGC TTCGTCTTCA GGGGGAGCGT CTTCGGGGGT GTCGTCCCTG AGCGCCAGCC AGTTGAGCGA CTTGAATGCG AAGTACGTCG AAGCCAGAAA GGCGCGTCTG GAAGCAGAAA CGGCTTACGG TCAGATCGCC GGCCTTGGCG GCCAGGTGCC CGACAACATC GAAAGCATGC CGGCGATCTA CGGCGACGAA ACGGTGCGCG ATCTCAAGCA GCAGGAACAC GAGGCGCTGA CGCGCGTCAA CGAGTTGTCC AGCCGCTACG GCGCGCAGCA TCCGGAGCGG GTGACCGCGG AGACCCATCT CGAATCGGTA CGAACCGCGT TGAAGAAGCA GATCGCCAGC GTGGCCGCCC GGCTGAAGCA GCAGATCGCG GTCGCGTATG CCAACGAGAA TGCGCTGGCC GGCCAGATCG ACGGGCTCAA GAACGAATTG CAGGGGATTG CCAGGAAAGA AAGCGTATAT CGCGAATTGC AGCGGGAGGT GCAGTCCAAC CGCGAGCTTT ACGAGATGTT TTTCAAGCGC CTCAAGGAAA CTTCCGAGGC GGGCGACCTG CAGCCCTCCA ATGCCCGCAT CATGGACGCC GCGATTCTGC CCAGGGTGCC GGTGAAGCCG AACAAGAAAC TGGGCGTGAC CATCGCTTTT TTCCTTTCTC TGATGGCCGG AATCGGCCTC GCCTTCCTGC TCGATTTCAT GGACAAGTCG TTCCGGAGTT CGGGCGAGAT GGAGCAGAAG CTGGGGCTCC CCTTGCTGGG CCTGGTGCCC CTGGTGACCC AGAAGCAGAA GCGAGGCGTC AAGGAAGATG TGTCAAAGGT CTTCCTGGAA GATCCGCGCG GCAGTTTCGC GGAATCGGTG CGCACGATTC GCACCGGCAT CATGCTTTCC GCGCTGGACG ATCCGCGCAT GAGCATCCTG GTGACGTCCT CGCTGCCGGG CGAAGGGAAG TCGTCGATTT CGATGAGCCT GGCCTATGCC CTGGCCCAGC TCAATTCCAG GGTGCTGGTC GTGGAGGCGG ATCTGAGGCG GCCCAATCTG GCCAAGCGCT GCGGCCTGTC CGCGAAGATG CCCGGTCTTT CGAACCTGGT GGTGCAGACG GCGACCCTGG AGGAGTGCAT CCACCATTAC GACGCGGGCA ACATCGATCT GATGCCGGCC GGGATCATTC CGCCGAATCC GCTCGAGCTG CTGTCTTCCC ACCGCTTCGC CGAAGCGATG GCCGCACTCG AGAGCGAGTA CGACGCGATC ATCCTCGACG CGCCGCCGAT GCAGCCGGTG AGCGATGCGC TGGCACTGTC CCGGCTGGTC CGGTCGGTGA TCTACGTGGT CCAGGCGGAA AAAACGCCGG TGCACATGGC GCGTTCGGGC ATCGACCGGC TGCGCAAGGT TCGTGCGCCG CTGACCGGCG TGGTCCTGAG CCAGTTGAAC CTGGAAAAAA GCCGGCGCGG CTACAGCAGC TATTACTACA GCGACTATTA TTATGGGAGT TACAAGCAGG AAGGCGCCCA GTAA
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Protein sequence | MRQKLAESER RLQAYLENQK LVDIGNASSS GGASSGVSSL SASQLSDLNA KYVEARKARL EAETAYGQIA GLGGQVPDNI ESMPAIYGDE TVRDLKQQEH EALTRVNELS SRYGAQHPER VTAETHLESV RTALKKQIAS VAARLKQQIA VAYANENALA GQIDGLKNEL QGIARKESVY RELQREVQSN RELYEMFFKR LKETSEAGDL QPSNARIMDA AILPRVPVKP NKKLGVTIAF FLSLMAGIGL AFLLDFMDKS FRSSGEMEQK LGLPLLGLVP LVTQKQKRGV KEDVSKVFLE DPRGSFAESV RTIRTGIMLS ALDDPRMSIL VTSSLPGEGK SSISMSLAYA LAQLNSRVLV VEADLRRPNL AKRCGLSAKM PGLSNLVVQT ATLEECIHHY DAGNIDLMPA GIIPPNPLEL LSSHRFAEAM AALESEYDAI ILDAPPMQPV SDALALSRLV RSVIYVVQAE KTPVHMARSG IDRLRKVRAP LTGVVLSQLN LEKSRRGYSS YYYSDYYYGS YKQEGAQ
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