Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1175 |
Symbol | |
ID | 3102418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1230177 |
End bp | 1230635 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637170356 |
Product | polysaccharide biosynthesis/export protein |
Protein accession | YP_113641 |
Protein GI | 53804711 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.265571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCCGGTT ACAGGCTCGG TCCGGACGAC CTGATCAAGA TTTCCGTCCT GAACGAGCCC AATCTCAGCA TCGAAGCGAG GCTCAGCGAT GCGGGTACGG TTTCCTACCC GTTTCTGGGC GAGATTCACA TCAAGGGGAA GACTCCCGGT GAAGTGGAGC GTCTCATCAC GGATGGTCTC AGGGGCGCCT ATCTGGTCGA TCCGAAAGTG AACGTCAGCG TGCTGGAATA CCGGAAATAT TACATCGGCG GGCAGGTCAA GCACCCCGGC GCATATCCGT ATCAGCCCGG GCTGACGGTA GGGAAGGCCG TGGCTCTTGC CGGCGGCTTC GGCGAGCTGG CCTCCCGGGA CATCGTGATC CTCCGCGAGG ACGATCCTGC GCAGCCGCAG CTCGAGGCCG ACGTGATGAC GCCGGTGCAT CCGGGGGACG TCATAACGGT AGAGGAAAGC TTCTTCTGA
|
Protein sequence | MSGYRLGPDD LIKISVLNEP NLSIEARLSD AGTVSYPFLG EIHIKGKTPG EVERLITDGL RGAYLVDPKV NVSVLEYRKY YIGGQVKHPG AYPYQPGLTV GKAVALAGGF GELASRDIVI LREDDPAQPQ LEADVMTPVH PGDVITVEES FF
|
| |