Gene MCA1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1175 
Symbol 
ID3102418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1230177 
End bp1230635 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID637170356 
Productpolysaccharide biosynthesis/export protein 
Protein accessionYP_113641 
Protein GI53804711 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.265571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGGTT ACAGGCTCGG TCCGGACGAC CTGATCAAGA TTTCCGTCCT GAACGAGCCC 
AATCTCAGCA TCGAAGCGAG GCTCAGCGAT GCGGGTACGG TTTCCTACCC GTTTCTGGGC
GAGATTCACA TCAAGGGGAA GACTCCCGGT GAAGTGGAGC GTCTCATCAC GGATGGTCTC
AGGGGCGCCT ATCTGGTCGA TCCGAAAGTG AACGTCAGCG TGCTGGAATA CCGGAAATAT
TACATCGGCG GGCAGGTCAA GCACCCCGGC GCATATCCGT ATCAGCCCGG GCTGACGGTA
GGGAAGGCCG TGGCTCTTGC CGGCGGCTTC GGCGAGCTGG CCTCCCGGGA CATCGTGATC
CTCCGCGAGG ACGATCCTGC GCAGCCGCAG CTCGAGGCCG ACGTGATGAC GCCGGTGCAT
CCGGGGGACG TCATAACGGT AGAGGAAAGC TTCTTCTGA
 
Protein sequence
MSGYRLGPDD LIKISVLNEP NLSIEARLSD AGTVSYPFLG EIHIKGKTPG EVERLITDGL 
RGAYLVDPKV NVSVLEYRKY YIGGQVKHPG AYPYQPGLTV GKAVALAGGF GELASRDIVI
LREDDPAQPQ LEADVMTPVH PGDVITVEES FF