Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1105 |
Symbol | cydA |
ID | 3104501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1160863 |
End bp | 1162440 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637170290 |
Product | cytochrome d ubiquinol oxidase, subunit I |
Protein accession | YP_113575 |
Protein GI | 53804554 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGGTG AAGACATCGT CAACCTTTCC AGGCTGCAAT TCGGCCTGAC CGCGCTCTAC CATTTTCTGT TCGTGCCGTT GACCTTGGGG CTGGCTTTCC TGCTGGCCAT CATGGAATCG GTCTACGTGA TGACCGGCAA GGAGGTGTAC AAGGACATGA CCCGCTTCTG GGGGAAGCTG TTCGGCATCA ACTTCGCCAT GGGAGTGACG ACCGGCATCA CCCTGGAATT CCAGTTCGGC ACCAACTGGT CCTATTACTC GCACTACGTC GGCGATATCT TCGGCCCCAT CCTGGCCAGC GAAGGCTTGG TGTCGTTCTT CCTCGAATCG ACTTTCGTCG GGCTGTTCTT TTTCGGCTGG GACCGCATGA GCCGGGTGCA GCATCTATCG GTCACCTGGC TGCTGGCGCT GGGCACCAAC ACTTCCGCGT TGTGGATTCT GATCGCCAAT GCCTGGATGC AGCATCCGGT GGGCACGGAA TTCAACTACG AAACCCTGCG CATGGAGCTG ACCAGTTTCG CCGAGGTGTT CTTCAATCCC GTGGCCCAGG TCAAATTCGT GCATACGGTC GCGGCTGGCT ATGTCACCGG AGCGATGTTC GTCCTCGGCA TATCTTCCTG GTATCTGCTG AAGGGGCGGG ACGTCGGTTT CGCCCGCCGT TCCTTCTCGA TCGCGGCGGC GTTCGGACTG GCTTCGGTTC TCTCCGTCAT CGTGCTGGGC GATGAGAGCG GCTACACCGA CGGCGAGGTG CAGAAGGTGA AGCTGGCGGC GATCGAGGGT GCTTGGGATA CCGAGAAGCC GCCGGCAGCG TTCACGGTGG TCGGATTCCC GGATCAGGAC AGGGAAGAAA CCCGCTATGC ATTCAGAATA CCGTACGTGC TCGGCCTGAT CGCCACGCGT TCCATCGACG AAGAGGTCAA GGGACTCAAG GAACTGCGGG CGTCCAGCCT GGCCCACATC CGCAGTGGCC AGATCGCCTA TGGGGCGCTG GAGAGGATGA GGGGAGGGGA CGCCAGCCCG GCGGTGAAGG CGGATTTCGA GCAGCACAAG GCCGATCTGG GTTTCGCCCT GTTGCTTGCC AAGTATACGG ACCGCATCGC CGGGGCGGGG GAAGACCTGG TGCAGAAGGC GGCCGCCGAT ACCATTCCGA GCGTAGCGCC CTTGTTCTGG ACTTTCCGCG TGATGGTGGC CTGCGGCTTC ACCCTGCTGT TCATCTTCGT GATGGCCTTC TATTACTGCG CGGTGCGGGT GGCGGACCGC AAACGCTGGC TGCTGAAGCT GGCGGTCTGG TCCATCCCGT TGCCTTGGAT TGCGGCGGAA ACCGGGTGGT TCGTGGCCGA GTACGGCCGC CAGCCATGGA CCATTTCCGG TGTGCTTCCC ACGCACCTGA GTACCTCCTC ACTCAGCGCT GGGGATCTGT GGTTCAGCAT CGCGGGTTTC GCTTTCTTCT ACACGGCGCT CCTGGCGATC GAGCTTTACC TGATGGTCAA GTACGTCAAG CTCGGCCCCA GCAGCCTGCA CACGGGGCGA TATCATTTCG AGCGGCCGGC GGCGGCGCTC TCCGGTTCAG CAGTCTGA
|
Protein sequence | MIGEDIVNLS RLQFGLTALY HFLFVPLTLG LAFLLAIMES VYVMTGKEVY KDMTRFWGKL FGINFAMGVT TGITLEFQFG TNWSYYSHYV GDIFGPILAS EGLVSFFLES TFVGLFFFGW DRMSRVQHLS VTWLLALGTN TSALWILIAN AWMQHPVGTE FNYETLRMEL TSFAEVFFNP VAQVKFVHTV AAGYVTGAMF VLGISSWYLL KGRDVGFARR SFSIAAAFGL ASVLSVIVLG DESGYTDGEV QKVKLAAIEG AWDTEKPPAA FTVVGFPDQD REETRYAFRI PYVLGLIATR SIDEEVKGLK ELRASSLAHI RSGQIAYGAL ERMRGGDASP AVKADFEQHK ADLGFALLLA KYTDRIAGAG EDLVQKAAAD TIPSVAPLFW TFRVMVACGF TLLFIFVMAF YYCAVRVADR KRWLLKLAVW SIPLPWIAAE TGWFVAEYGR QPWTISGVLP THLSTSSLSA GDLWFSIAGF AFFYTALLAI ELYLMVKYVK LGPSSLHTGR YHFERPAAAL SGSAV
|
| |