Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1064 |
Symbol | rplJ |
ID | 3102656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1113506 |
End bp | 1114033 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170253 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_113539 |
Protein GI | 53804626 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0220515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACTGA GACTCGATGA CAAGAAAGCG GTCGTCGCCG AGGTTGCAGC CGTTGCCGCC CGAGCGCACT CCGCAGTTGC GGCGGAATAC CGGGGGCTGA GCGTCTCGGC ACTGACGCAG CTCCGCAAGG AGGCGCGTGA GTCCGGGGTA TACCTGCGCG TGGTCAAGAA CACCTTGGCG CGCAAAGCCG TCGAAGGCAC CGGTTTCGAG TGCATGCAGG ACGGTTTGGT AGGGCCCTTG ATCCTTGCGT TCTCCCTTGA GGATCCGGGC TCCGCGGCCC GCGTGGTCAG TGCGTTCGCC AAGACCAACG ACAAGCTCGT CGTGAAGTTG GTGGCGGTCG GCGGCAAACA ATATGGTCCT TCCGAGCTCG AGCGTTTGGC TTCGCTGCCG AACCGCGAGC AGGCGATCAG CATGCTGATG GGCACGATGA AGGCGCCAAT CGAAAAGTTC GTCCGCACCC TGGCGGAGCC GCACGCGAAG TTCGTGCGCA CCTTGGCGGC GGTTCGAGAT CAGAAGCAGG CCGCGTAA
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Protein sequence | MALRLDDKKA VVAEVAAVAA RAHSAVAAEY RGLSVSALTQ LRKEARESGV YLRVVKNTLA RKAVEGTGFE CMQDGLVGPL ILAFSLEDPG SAARVVSAFA KTNDKLVVKL VAVGGKQYGP SELERLASLP NREQAISMLM GTMKAPIEKF VRTLAEPHAK FVRTLAAVRD QKQAA
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