Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0894 |
Symbol | |
ID | 3105031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 939163 |
End bp | 940965 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637170090 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | YP_113383 |
Protein GI | 53804934 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.652846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATC GCTCCCGCCT GCATCGGCTC TGGCAGGTCC GCCGGTCCGT GCAGCTCGTC TGGAAAAGCA GCCCGAAGTC GACGCTGATA CACGGGGGAT TGATGTTGGT CCTGGGGCTT CTGCCTGTGG CGGGCCTTTA CTTGGTCAAG CTCATTATCG ACACCGTAAC CGCGCAGGAA GCGCCTGAGT GGGAAAGCAT CGGGGGCTTG CTTGCCGCAG CTTTGAGCAT TGCGGTACTC ACCGACTGGC TCCGTGCCTT GGATGCGCAT GTCAGTGAGA TCCAGTCTCA GCAGGTCACC GATCATGTGC ATGACTTGCT TCACAAGCAG GCGATTAGGT TGGACCTCGG CTATTATGAA AATCCCGAAT TCCAGGACAA TTTGCACCGT GCGCAGACCG AGGCGCCTTA TCGACCGGCT TTGATCATCG ACCGGCTCAT CAGTCTTTTG CAGAATGCCG TTTCCTTGGG TGCAATCGCA TTGCTGCTGC TGGCGTTTCA TTGGGAGTTG ACCCTTGGCC TGTTTCTTTT CATGTTGCCC ATCCTTTTCG TCCGGATGCG CCATGCGCGA CTTCAGCATC GGCATTGGCA GAGTTGGACC GCTCGGCAAC GTCAGGCGTA CTATTTGAGC CAATTGCTGA ATTTCCAGGA CCATGCCAAG GAGGTAAGGC TATTCGGGCT AGGGAACCAT CTTCACCAAC GGTTTATGGA CTTGCGGAAG TCGATTCGTC AGGACCGCCT GGCGTTATCG CGCGATCGGA CCAAAGGAGA GGCGCTTACT CAAGGCTGCG CATCCTTGGG TGTTTACGGC GCACTTGCTT TTCTCGCTTA TCAAACCATG GTGCGAGCCA TCAGCATCGG CGACATGGTG GTCTATTATC AGGCGTTGCA GCGAGGTCAA GCGTTATTGC GGGATTTATT CGCCAGCGCC GCCGGTCTTT ACGAGAACGC GCTGTTCCTG GCGAATTTTT ACGACTTTCT ATTGCTGGAA CCGCGGGTGA AAGAACCGGA AGTGCCCTGC GTGATTCCGC AGCCGCTGCG AGGTGAGATT CGCTTTGAAT GCGTCAGGTT CGACTATCCG CACGGAACGC GTCCGGTATT GAAAGCGGTG GACATGACGA TTTCTGCGGG GGAAAAAGTG GCTCTGGTCG GCAAGAACGG TGCCGGCAAG ACTACACTGG TTAAACTGTT ATGCCGGTTG TACGATCCTA CGGAAGGTCG AATCACAGTA GATGGTATCG ATCTTCGTAA TTTCTCAAGC GAAGAGTGGC GAAAGCAAAT CGGCGTGGTT TTCCAGGATT TCGGCCGTTA TCAATTTACC GTCAGGGAGA ACATTGGGTT TGGCGACCTT GTTGCTCGGA ATCTACCTGG ACAAATCGAA CAAGCGGCCC GGCTTAGCGG AGCGGATGGA TTCATAGCGG GTCTCCCTCA CGGCTATGAC TCGCTACTCG GTACATTGTT TGCCGGCGGA GAGGAACTGA GTATCGGCCA GTGGCAACAG ATCGCGATCG CTCGGGCAGC CTTGCGATCG GCACCCATCA TCATCTTGGA CGAACCGACC AGCGCACTGG ATCCGGAAGC CGAAGCCCAG GTGTTGGAGC GGTTCCGGCA GATAGCGGAG GGACGGACCG CGATTTTGAT CAGTCACAGG TTGTCTACGG TGTGTATGGC GGACCGTATT TTCGTGCTCG ATGACGGCAG GGTTTGCGAG TCTGGAACGC ATACAGAACT GCTCAGTCTC AATGGCGTTT ATGCGGGGAT GTTCCATTCT CAGGCGCGAC ACTATCGAAC CGTGCAAGAG TGA
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Protein sequence | MFDRSRLHRL WQVRRSVQLV WKSSPKSTLI HGGLMLVLGL LPVAGLYLVK LIIDTVTAQE APEWESIGGL LAAALSIAVL TDWLRALDAH VSEIQSQQVT DHVHDLLHKQ AIRLDLGYYE NPEFQDNLHR AQTEAPYRPA LIIDRLISLL QNAVSLGAIA LLLLAFHWEL TLGLFLFMLP ILFVRMRHAR LQHRHWQSWT ARQRQAYYLS QLLNFQDHAK EVRLFGLGNH LHQRFMDLRK SIRQDRLALS RDRTKGEALT QGCASLGVYG ALAFLAYQTM VRAISIGDMV VYYQALQRGQ ALLRDLFASA AGLYENALFL ANFYDFLLLE PRVKEPEVPC VIPQPLRGEI RFECVRFDYP HGTRPVLKAV DMTISAGEKV ALVGKNGAGK TTLVKLLCRL YDPTEGRITV DGIDLRNFSS EEWRKQIGVV FQDFGRYQFT VRENIGFGDL VARNLPGQIE QAARLSGADG FIAGLPHGYD SLLGTLFAGG EELSIGQWQQ IAIARAALRS APIIILDEPT SALDPEAEAQ VLERFRQIAE GRTAILISHR LSTVCMADRI FVLDDGRVCE SGTHTELLSL NGVYAGMFHS QARHYRTVQE
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