| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0684 |
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| Symbol | secF |
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| ID | 3102142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 715558 |
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| End bp | 716487 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637169894 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_113195 |
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| Protein GI | 53805141 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.738953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCT TCAAGATCAA GCGTGACATC CCGTTCATGC GTTACGGGAG GCTCACGACG
ACCATCTCCC TGGTGACCTT CATCCTCGCC ATCCTGGCTT TGGGGTTCAA GGGCCTCAAT
CTGGGCATCG ACTTCACCGG CGGCATCCTG ATGGAGGTCC GTTATGCCCA GCCCGCCGAC
CTCGAAGCGA TACGCAAGAC GTTGGAGGAG CAACGGATCG CCGAAGCCGC CGTGCAGAAT
TTCGGCACTT CCCGCGACGT CCTGATTCGC CTCCCGCTGC GAGAGGATAC CGGCGCCAGG
CAGAGCGACC AGATCTTCTC GGCGCTCAAG GCCCAGGACG GGACGGCCGA ACTCAAGCGC
GTCGAGTTCG TCGGGCCGCA GGTCGGCAAG GAAATGTATG AAAGCGGTGG ACTGGCGCTC
ATGCTCGTGG CCGCCGGCAT CATGGCCTAT CTGGCGATGC GGTTCGCCTG GCGGTTCGCC
GTCGCGGCGA TGATCGCCAA CATGCACGAC ATCGTCATCA TCTTGGGGAT GTTCGCCTTC
TTCGAGTGGG AATTCACGCT CAGCGTGCTC GCCGGCGTGC TCGCCATCCT GGGCTACTCG
GTGAACGAGT CCGTGGTGGT GTTCGACCGG GTGCGTGAGA ACTTCCGCAA GATGCGCAAG
GCGGCGGTGA CGGACGTCAT CGACAACGCC ATCACTGCCA CCATGTCCCG CACCATCATC
ACCCATTCCA TGACGCAGCT GATGGTGCTG GCGATGTTCT TCTTCGGCGG TGACGCCCTG
CACAACTTCG CCCTGGCGCT GACCATCGGC ATCGTGTTCG GCATCTATTC CTCGGTGCTG
GTCGCCTGCC CCGTCGTGCT GGCGCTGGGC GTAAGCCGGG CCGATCTGCT GCTGCCCGAG
AAGGAAGGGC TGGTCGATAA CCGGCCCTGA
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| Protein sequence | MEFFKIKRDI PFMRYGRLTT TISLVTFILA ILALGFKGLN LGIDFTGGIL MEVRYAQPAD
LEAIRKTLEE QRIAEAAVQN FGTSRDVLIR LPLREDTGAR QSDQIFSALK AQDGTAELKR
VEFVGPQVGK EMYESGGLAL MLVAAGIMAY LAMRFAWRFA VAAMIANMHD IVIILGMFAF
FEWEFTLSVL AGVLAILGYS VNESVVVFDR VRENFRKMRK AAVTDVIDNA ITATMSRTII
THSMTQLMVL AMFFFGGDAL HNFALALTIG IVFGIYSSVL VACPVVLALG VSRADLLLPE
KEGLVDNRP
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