Gene MCA0681 details

Gene Information

• Locus tag: MCA0681
• Symbol: tgt
• ID: 3102289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 712124
• End bp: 713236
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637169891
• Product: queuine tRNA-ribosyltransferase
• Protein accession: YP_113192
• Protein GI: 53805144
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0343] Queuine/archaeosine tRNA-ribosyltransferase
• TIGRFAM ID: [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming; [TIGR00449] tRNA-guanine transglycosylases, various specificities

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.111123
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTCG CTGTCAAATG CTGCGATGGT CCGGCCCGCC GGGGCGAGCT CTCGTTTCCT 
CGCGGTCGTG TGCAGACGCC GGCTTTCATG CCGGTGGGTA CCTATGGCAC TGTCAAGGCC 
ATGACGCCTG AGGAATTGCG CGACAGTGGC GCGGAGATCA TTCTCGGCAA TACCTTCCAT 
CTGATGCTGC GTCCGGGCGT GGATATCATC CGTGCCCACG GTGACCTGCA CGGGTTCATG 
CACTGGGACG GGCCGATCCT TACCGACTCG GGCGGCTTCC AGGTGTTCAG CCTGGGCGCG 
ATGCGCAAGA TCGGCGAGCA GGGCGTGCTG TTTCGCTCGC CCATCGACGG GAGCCCCGTC 
TTCATGGGGC CGGAAGAGTC CATGGCCGTC CAGCGCGCGC TGGGCTCGGA CATCGTGATG 
GTGTTCGATG AATGTACGCC ATACCCGGCG GAATACGGCG AGGCGCGCGC ATCGATGGAA 
CTCTCGCTGC GCTGGGCGGA GCGCAGCAAG GCGGCGCACG CGGATAACCC TTCCGCGCTG 
TTCGGCATCG TCCAGGGCGG TATGTACGAA GACCTGCGGG CCCGTTCGAT CGCGGGTTTG 
CAGGAGATCG GCTTCGACGG CTACGCGATC GGCGGCCTCT CGGTTGGAGA GCCCAAGGAG 
GACCGCCACC GGGTACTGGA GGCGCTGATG CCGCAGATGC CCGCCGAGCG TCCCCGCTAT 
CTGATGGGAG TGGGCACGCC GGAAGACATC GTCGACGCGG TGACGCGCGG CATCGACATG 
TTCGACTGCG TGCTGCCGAC CCGCAATGCG CGCAACGGCC ATCTTTTCAC CCGCTTCGGG 
GCGGTCCGTA TCCGCAATGC CCGGTACCGG GACGATCTGC GGCCGATCGA CGAGGAGTGC 
GGCTGTTACA CCTGCCGTCA CTATTCCCGT GCCTACCTGC GCCATCTCGA CCGTTGCGGC 
GAGATCCTCG GGGCGCGTCT GAACACCATC CACAACCTGT TCTATTACCA GGAACTGATG 
GCAGGTCTGC GGGCTGCCAT CGAGGAAGGA ACCCTCGAGC GGTTCGTCGA CCGATTCCAT 
GTCCTCCGCT CCACCGGTAA CGCATTTATG TGA 

 

Protein sequence

MEFAVKCCDG PARRGELSFP RGRVQTPAFM PVGTYGTVKA MTPEELRDSG AEIILGNTFH 
LMLRPGVDII RAHGDLHGFM HWDGPILTDS GGFQVFSLGA MRKIGEQGVL FRSPIDGSPV 
FMGPEESMAV QRALGSDIVM VFDECTPYPA EYGEARASME LSLRWAERSK AAHADNPSAL 
FGIVQGGMYE DLRARSIAGL QEIGFDGYAI GGLSVGEPKE DRHRVLEALM PQMPAERPRY 
LMGVGTPEDI VDAVTRGIDM FDCVLPTRNA RNGHLFTRFG AVRIRNARYR DDLRPIDEEC 
GCYTCRHYSR AYLRHLDRCG EILGARLNTI HNLFYYQELM AGLRAAIEEG TLERFVDRFH 
VLRSTGNAFM