Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0438 |
Symbol | |
ID | 3104793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 448809 |
End bp | 449222 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637169657 |
Product | biopolymer ExbD/TolR family transporter |
Protein accession | YP_112968 |
Protein GI | 53802326 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.744335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGGA CCGGCGGTGC CGAAGAGAGC GCCGATGCGA TCAACCTCAC CCCCCTGATC GACATGGTGT TCATCCTGCT GATCTTCTTC CTGGTGACGA CCTCGTTCAT CCACGAGTCG TCCATCGCAG TGCAGCGTCC CAGGGCCGCC ACGGCGACGC TGGCGCGCAA CGTCGAGGTC GTCGTCACGA TCGGCGCGGA CGAGCAAGTC TGGCTCAACG ACGTCTCGGT GGACGTCCGC CTGTTGCGTG CCCGCCTCGA AGGTTCGGGA CTCGGCAATC CGGCGCGCTC GGCCATCATC CTGGCCGACG CCCGGACCAC GACGGGGCTG CTGGTGAAGG TCATGGACCA GCTCCGGCTG GCCGGCTTCA CCAACATTTC GGTGGCGGCC AGCTCCTCGC CCGAACCTCC GTGA
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Protein sequence | MSRTGGAEES ADAINLTPLI DMVFILLIFF LVTTSFIHES SIAVQRPRAA TATLARNVEV VVTIGADEQV WLNDVSVDVR LLRARLEGSG LGNPARSAII LADARTTTGL LVKVMDQLRL AGFTNISVAA SSSPEPP
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