Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0396 |
Symbol | xerD |
ID | 3103749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 399926 |
End bp | 400855 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637169616 |
Product | tyrosine recombinase XerD |
Protein accession | YP_112927 |
Protein GI | 53802409 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGAGG TTCTGCCCGA TGCCGGAGCA GTCCGGGAGG CCGACCTTCT GGCGATCCAG CGCTTCGTCG AGTCGCTGTG GGTGGAAGAG GGTTTGAGCC CTCACACACT CAAGGCCTAC GGGAGCGATC TCCGTCTCTT CGCAGCCTGG CTGGCAACCA ACCGGTGCGC GGAGCTGACG GCACTGACCG GGGAAGACAT CGAGGCCTAT CTGGGGTGGA GGCACAGCCG GAAAAGCAAG AGCCGGACTT CGGCGCGCGT ACTTTCCTCC ATCCGGCATT TCTGCGCGTA CCGACTGCGA CGGGGAGAGA TCACCGGTGA TCCTTGTGCC TTGATTGCTC CGCCGAAGCT GGGGCGTTTC CTTCCCGACA CGCTGACAGA ATCGGAGGTG GAGGCCCTGC TGGCCGCGCC GGACGTCGAT ACTCCGCTGG GCTTCCGCGA CCGGGCCATG CTGGAAATGC TCTACGCCAC CGGTTTGCGC GTCTCCGAGC TGGTCGGTTT GAGCTTCGGC CAGATCAGTC TGCGCCAGGG GGTGGTCCGG ATCAGTGGCA AGGGGGACAA GGACCGGCTG GTGCCTGTCG GCGAGGAGGC CCTGGACTGG CTGGAGCGCT ATCTCGACAA GGTGCGGCCG GTCACCCTGA AGGGTAGGCA GAGTGATTTC CTGTTCGTCA CCGACCGGGG GGGGGCGATG ACGCGCCAGG CCTTCTGGCA TCTCATCAAG CGTTACGCCG GGCAGGCCGG GATTTCCAAG CCGTTGTCCC CCCATACCCT GCGTCATGCC TTCGCGACTC ATCTGCTGAA TCACGGAGCG GATCTCCGCG TCGTGCAAAT GCTGCTCGGA CACAGCGACC TGTCGACCAC CCAGATCTAC ACCCATGTCG CCCAGGAGCG GCTCAAGGAA CTGCATACCC GCTTCCATCC GCGGGGCTGA
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Protein sequence | MSEVLPDAGA VREADLLAIQ RFVESLWVEE GLSPHTLKAY GSDLRLFAAW LATNRCAELT ALTGEDIEAY LGWRHSRKSK SRTSARVLSS IRHFCAYRLR RGEITGDPCA LIAPPKLGRF LPDTLTESEV EALLAAPDVD TPLGFRDRAM LEMLYATGLR VSELVGLSFG QISLRQGVVR ISGKGDKDRL VPVGEEALDW LERYLDKVRP VTLKGRQSDF LFVTDRGGAM TRQAFWHLIK RYAGQAGISK PLSPHTLRHA FATHLLNHGA DLRVVQMLLG HSDLSTTQIY THVAQERLKE LHTRFHPRG
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