Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0332 |
Symbol | hemE |
ID | 3102300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 327389 |
End bp | 328441 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637169552 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_112864 |
Protein GI | 53802347 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0475139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCATT GTTTCATTCG CGCCCTGCTG CGCCAGCCGG TCGAACGGAC GCCGGTCTGG ATGATGCGCC AGGCGGGCCG TTACCTGCCG GAATACCGCG AGGTCCGGGA GCGGGCCGGC AGCTTCATGA ATCTCTGCAC CTCCCCCGAA CTCGCCTGCG AAGTGACTTT GCAGCCGCTG GAGCGCTACC GGCTGGATGC GGCGATCCTG TTCTCCGACA TTCTGACCGT ACCTGACGCC ATGGGGCTGG GTCTGGAATT CGTCGAGGGC GAGGGACCGA GGTTCCGCAA CCCGATCCGG GGGGCTGCGG ACATCCACCG GCTGGGTGTG CCGGATCCGG AAGCGGAGCT GGCCTACGTG CCGGCCGCGG TGCGGCTGAT CAAGCAGCGC CTGGGTGATC GGGCCCCGTT GATCGGGTTC TCGGGCAGTC CCTGGACCCT GGCGACCTAT ATGGTGGAAG GGGGCAGCAG CCGGGAGTTC CGCAAGGTCA AATGCCTCAT GTACGAGGAG CCGGCGCTGA TGCACGAACT GCTGGAAAAG CTTGCTGATG CGGTCGCCTT GTATCTGAAC GCCCAGATCG CGGCGGGCGT CGATGCCGTG ATGGTGTTCG ACACCTGGGG CGGCAATCTG GATACGGAGC ACTATCTGGC ATTTTCGCTG CGCTACGCCG AGCGCGTGCG CCAGCAGCTC CGGCTGACCG GGCGGGGCCG CATCCCCGCG ATCTTCTTCA CCAAGGGCGG CGGGCAATGG CTGGAGGCGA TGGCGGACGC CGGTTATGAC GCGCTCGGTC TGGACTGGAC CACGGACATC GGTTCGGCGA GACAGAGGGT CGGCGACAGG GTGGCTTTGC AGGGCAACCT CGATCCGGTG GCGCTCTATG CCAGACCCGA AATCATTCGC GGGGAAGTCC GGAAGATCCT GGAGCGTTAC GGTAGGGGCA GCGGCCATGT GTTCAACCTC GGCCATGGGG TCACGCCCGA CATCAAGCCC GAGCATGTGG GCGCGATGAT CGAGGCGGTG CACGAATTCA GCCCGGCGTT CCACCGGACT TGA
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Protein sequence | MTHCFIRALL RQPVERTPVW MMRQAGRYLP EYREVRERAG SFMNLCTSPE LACEVTLQPL ERYRLDAAIL FSDILTVPDA MGLGLEFVEG EGPRFRNPIR GAADIHRLGV PDPEAELAYV PAAVRLIKQR LGDRAPLIGF SGSPWTLATY MVEGGSSREF RKVKCLMYEE PALMHELLEK LADAVALYLN AQIAAGVDAV MVFDTWGGNL DTEHYLAFSL RYAERVRQQL RLTGRGRIPA IFFTKGGGQW LEAMADAGYD ALGLDWTTDI GSARQRVGDR VALQGNLDPV ALYARPEIIR GEVRKILERY GRGSGHVFNL GHGVTPDIKP EHVGAMIEAV HEFSPAFHRT
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