Gene MCA0328 details

Gene Information

• Locus tag: MCA0328
• Symbol: pilP
• ID: 3102551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 322966
• End bp: 323508
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637169548
• Product: type 4 fimbrial biogenesis protein PilP
• Protein accession: YP_112860
• Protein GI: 53802351
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3168] Tfp pilus assembly protein PilP

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.871784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGTTC GTGCGAAGTA CGCATGGGCG CCGGCGGTGC TGGTTTGCTT GTCCGGTTGC 
GCCGAGGACG AATTGGCCGA CCTCAGGAGC TATGTGGCCG ACGTCAAGGC GCGCCAGAAA 
ATCACTATCG AGCCGCTGCC GGAAATCAGA ACGGTATCGC CATTCCTGTT CAACCCGGCC 
GGTTTGCATG ATCCTTTCAA ATCCATCGAA AAGCCCGACG ATGCCGGGAC AGCGGCGGCC 
GACAACGGGA TTCGCCCGGA CTTGTCCCGC CAGAAGGAGC AGCTCGAGAG TTACGAGTTG 
GATACCTTGA GAATGGTCGG GACGGTCCGG ATGTCCGGAA TCATGTGGGC GCTGGTGCGG 
GCCGCCGACG GCACGATACA CCGGGTCCGG ACCGGTAACC ACATGGGCAG GAATTTCGGC 
AGGATCACCC GCATCAGCGA AAACGGGGTG GAGCTGGTCG AAATCGTTCC GGATGCACAG 
GGCGGATGGC TCGAGCGCAT CACCACGATG ACGCTGATCG AAGCCGGTGG TGACAAAAAA 
TGA 

 

Protein sequence

MMVRAKYAWA PAVLVCLSGC AEDELADLRS YVADVKARQK ITIEPLPEIR TVSPFLFNPA 
GLHDPFKSIE KPDDAGTAAA DNGIRPDLSR QKEQLESYEL DTLRMVGTVR MSGIMWALVR 
AADGTIHRVR TGNHMGRNFG RITRISENGV ELVEIVPDAQ GGWLERITTM TLIEAGGDKK