Gene MCA0299 details

Gene Information

• Locus tag: MCA0299
• ID: 3103066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 293402
• End bp: 295261
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637169521
• Product: methanol dehydrogenase protein, large subunit, putative
• Protein accession: YP_112833
• Protein GI: 53802410
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG4993] Glucose dehydrogenase
• TIGRFAM ID: [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0065801
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC CCGTGAAAAG CTGGCTCATC GCAAGTTCCA TAGCATCGTT GCTGGCAGTA 
CCCGGGGTCT CTTTCGCGAA CGCTGAAGTG GAAGCACTCA CCAAGGATCC GAAGAACTTT 
GCGACTTGGG GTGGCAACTA CGCGGGCACG CGTTACAGCA CGCTGGACCA GATCAATTTC 
AAGAACGCCA AGCATCTGCA GCCGGTCTGG ACGTTCTCCA CGGGCATGCT GCGCGGCCAT 
GAAGGCGGTC CGCTCGTCGT CAACGACGTG ATCTACATTC ATACCGGGTA TCCCCACAAG 
GTCTACGCCC TCGATCAGGC GACTCAGTCC GTGATCTGGG AATATGTCTA TGCTCCCGAC 
AAGGGCACCG ATCAGTCACA GGTCATTTCC GTGATGTGCT GCGACGTGGT CAACCGCGGT 
CTGGCCTACG GTGACGGCAA GATCTTCCTG GCCCAGGGCG ACGCTACGCT GGTGGCCCTC 
GACGCCAAGA CCGGCAAGAT CGTCTGGAAA GTCAAGAACG GCGATCCGAA GACCGGCATG 
ACCGCCACCA ACGCCCCCCT GGTCGTCAAG GACAAGGTCC TGACCGGTAT CTCCGGTGGT 
GAATTCGGCG TGCGCGGCTT CCTGGCTGCT TATAACATCA AGGACGGTTC GCTGGTATGG 
AAGAAGTACA GCATGGGTCC GGATGACGAG GTCGGCCTGG ATCCCGAGCA CACCATGACC 
TGGACCGATG GCAAAATGGC GCCGGTCGGC AAGGATTCCT CGCTGAAGAC CTGGCAAGGC 
GACCAGTGGA AAATCGGCGG CGGTACCACC TGGGGCTGGT ACAGCTACGA CCCGGATCTG 
AATCTGGTTT ACTACGGTTC GGGCAACCCC AGCACCTGGA ACCCGGTGCA GCGTCCTGGC 
GACAACAAAT GGTCGATGAC CATCTGGGCT CGTGACGTCG ATACCGGTGA AGCCAAGTGG 
GTCTACCAGA TGACCCCGCA TGACGAATGG GACTATGACG GCATCAACGA AATGATGCTG 
ATCGACCAGG AAATGACCGC GAAGGACGGA TCCAAGCACT CCAAGCTGCT GACCCACTTC 
GACCGTAACG GCTTTGGCTA CACCCTGGAC CGCGTCACCG GCGAGCTGCT GGTGGCCGAG 
AAGTTCGACA AGGCCGTCAA CTGGGCGACT CACGTCGACA TGAAGACGGG CCGTCCGCAG 
GTCAATCCGA AGTACTCCAC CCAGCATGGC GGCCAGGACG TCGACACCAA GGGCATCTGC 
CCCTCGGCCA TGGGCGCCAA GAACGAGCCC CCGGTCACTT ACTCGCCGCG GACCAAGCTC 
ATCTACATCC CGGGTAACCA CACCTGCATG AACTATGAGC CGTTCGAGGT CGAATACACC 
GCAGGCCAGC CGTATGTCGG CGCCACGCTG AACATCTTCC CGGCCAGGGC CAACGTGAAA 
ACCGGCGAGA AGGAATCGAG CAACCACATG GGGTCCTTCA CCGCCTGGGA TCCGACCACC 
GGTACCATCG CCTGGCAGTT CGACGAACCC TTCTCGCTGT GGAGCGGCAT GGTTTCGACC 
GCCGGCGACA TCGTGATTTA CGGTACGCTG GAAGGCTACC TGAAGGTGCG CGATGCCAAG 
ACCGGTGAGG AACTGTACCG GTTCAAGACG CCGTCGGGCA TCATCGGCAA CGTCAGCACC 
TGGACCTACA ACGGCAAGCA GTACATCGGC GTGCTGTCCG GCATCGGTGG CTGGGCTGGC 
GTGGGCATGG CGGCCGGTCT GGAAGGTGAT ACCGAAGGTC TGGGTGCGGT GGGTGCCTAC 
AAGGGTCTGA GCAGCCATAC CAAGCTGGGT GGTGTGTTCA CCGTGTTCGC TCTGCCGTAA 

 

Protein sequence

MKKPVKSWLI ASSIASLLAV PGVSFANAEV EALTKDPKNF ATWGGNYAGT RYSTLDQINF 
KNAKHLQPVW TFSTGMLRGH EGGPLVVNDV IYIHTGYPHK VYALDQATQS VIWEYVYAPD 
KGTDQSQVIS VMCCDVVNRG LAYGDGKIFL AQGDATLVAL DAKTGKIVWK VKNGDPKTGM 
TATNAPLVVK DKVLTGISGG EFGVRGFLAA YNIKDGSLVW KKYSMGPDDE VGLDPEHTMT 
WTDGKMAPVG KDSSLKTWQG DQWKIGGGTT WGWYSYDPDL NLVYYGSGNP STWNPVQRPG 
DNKWSMTIWA RDVDTGEAKW VYQMTPHDEW DYDGINEMML IDQEMTAKDG SKHSKLLTHF 
DRNGFGYTLD RVTGELLVAE KFDKAVNWAT HVDMKTGRPQ VNPKYSTQHG GQDVDTKGIC 
PSAMGAKNEP PVTYSPRTKL IYIPGNHTCM NYEPFEVEYT AGQPYVGATL NIFPARANVK 
TGEKESSNHM GSFTAWDPTT GTIAWQFDEP FSLWSGMVST AGDIVIYGTL EGYLKVRDAK 
TGEELYRFKT PSGIIGNVST WTYNGKQYIG VLSGIGGWAG VGMAAGLEGD TEGLGAVGAY 
KGLSSHTKLG GVFTVFALP