Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0274 |
Symbol | |
ID | 3102312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 258432 |
End bp | 261440 |
Gene Length | 3009 bp |
Protein Length | 1002 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637169495 |
Product | type I restriction-modification system, R subunit, putative |
Protein accession | YP_112808 |
Protein GI | 53802459 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.273589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGA CTGACACCAG CGAAAAGGGC CTCGAAGCCC TGATCGTGCG CGACCTGGTC GCCAGCGGCT ACGTACAGGG CCATGCCGCG GACTACAACC GCGATGTGGC GCTGGACGTG ACCCAGTTGC TCGCCTTTCT TCGGGCGACG CAGCCGAAAG TTGTCGAAAC GCTGAACCTG GGCGCCGAAG GCATTCAGCG CACCCAGTTT TTGCACCGCC TGCAGGGCGA GATCACCAAG CGCGGCGTGG TGGACTGTTT GCGCCGCGGT GTTAGCCACG GCCCGGTACA CGTGGACCTT TACAAGCTGT TGCCCACCCC GGGCAATGCT GCCGCTGCCG AGGCCTTCGG CAAGAACATT TTCAGCGTCA CGCGGCAGGT GCGCTACAGC AACGACGAGT CCCAGCGCGC GCTGGATATG GTGATTTTCA TCAACGGCCT GCCGGTGCTC ACCTTCGAGC TGAAGAACTC GCTCACCAAG CAGACCGTCG CGGACGCCAT CGTGCAGTAC CAGACCGATC GCAACCCGGA TGAGCTGCTG TTCCAACTCG GCCGCTGCGT TGCCCACATG GCGGTGGACG ACGCCGAGGT GCGCTTTTGC ACTCACCTGA CCGGCAAGAC CTCCTGGTTC CTGCCTTTCA ACCAAGGTTG GAACAGCGGC GCAGGCAACC CACCGAATCC TCATGGTCTG AAGACCGACT ATCTATGGAA GCAGGTGCTG GTGAAGGAGT CGCTGGCTAA CATCATCGAG AACTACGCGC AGCTGGTAGA GGAGGAAGCG GAAGACGCCA ATGGCCGCAA GCGCAAGACG CGCAAACAGA TCTTCCCCCG GTACCACCAA CTTCGCACTG TTCGCGCCCT GTTGCGGCGC AGCCAAGCGG ATGGTGTCGG CAAGCGTTAC CTGATCCAGC ATTCAGCCGG CAGCGGCAAG AGCAACACGA TTGCCTGGCT GGCCCATCAG CTGGTGGAAC TGAAGACGGC GGCGGATGCG GGGCAGGCCC AGTTCGACTC CGTCATCGTC ATCACCGACC GCCGTGCGCT GGACACGCAG ATTGCCCGCA CGATCCGGTC CTACGACCAT GTGGCCTCGA TCTACGGTCA TTCGGAAAGC GCCGAGGAAC TGCGCACTTT CCTGCGCCGA GGCAAGAAGA TCATCGTCAC CACGGTGCAG AAGTTCCCGT TCATCCTGGA CGAGCTGGGG GATCTCGGCG ACAAGAAGTT CGCGCTGTTG ATCGACGAGG CCCACTCCAG CCAGGGCGGC AAGACGACGG CCAAGATGCA TCTGGCCTTG TCCGGACAAG CCGCGGAAGG CGGCGAGGAC GAAGAGGAAG AATCGGTCGA GGACAAGGTC AACGCCTTGA TCGAATCCCG CAAGATGCTG GCCAACGCCA GCTACTACGC CTTCACGGCC ACGCCCAAGA CAAAGACCTT GGAGCTCTTC GGCGAGCGTC AGGTTGTCGG CGACACGGTG CAGTTCCGCT CGCCCGAGGA GCTGACGTAT ACCACCAAGC AGGCGATTCA GGAAGGCTTC ATCCTCGACG TGATCGCCAA CTACACCCCG GTGTCGAGCT TCTATCACAT TGCCAAGACC GTCGAGCACG ATCCGGAGGT GGACAAAGCC AAGGCGCTGA AGAAGATTCG GCGCTACGTG GAATCCCACG ACAAGGCGAT CCGTCGCAAG GCGGAGATCA TGGTCGATCA CTTTATTGAA CAGGTGATCG GCGCCAAGAA GATCGGCGGC AAGGCGCGCG CGATGATCGT CTGCAACGGA ATCGCACGGG CCATCGACTA CTTCCGTGAG GTTTCAGACT ACCTTCGCGA GATCAAGAGC CCATACAAGG CCATCGTGGC GTACTCCGGC GATTTCGAGG TCGGCGGGGT GAAGAAGACC GAGGCCGATC TCAACGGATT CCCGAGCAAG GACATTCCGG CCAAGCTCAG GCAAGACCCG TATCGCTTCC TGATCGTCGC GAACAAGTTC GTCACCGGCT TCGACGAGCC GCTGCTGCAC ACCATGTATG TGGACAAACC CCTGGCGGGC GTCCTGGCCG TGCAGACGCT CTCGCGACTG AACCGCGCGC ATCCGCAGAA GGCCGACACG TTCGTGCTCG ACTTCGCCGA CAACGCGGAG GCCGTCAAGG CGGCCTTCCA GGAGTACTAC CGCGCCACGA TCCAGGAGGG GGAGACCGAT CCGAACAAGC TGCACGACCT GAAGAGCGAT CTGGACGCCC AGCAGGTCTA CAGCTGGCAA CAGGTCGAAG ACCTCGTCGC GCAGTACCTT GGCGGAGCGG AGCGGGATCA GCTCGATCCA ATCCTCGATG CCTGCGTCGC GGAGTACGTC GAGAAGCTCT CTGAAGACGA CCAAGTGAAG TTCAAGGGCA AGGCAAAGGC CTTCGTCCGC AGCTACGGCT TCCTGGCGGC CATTCTGCCC TACGGGCATC CGGCATGGGA GAAGCTGTCG ATCTTCCTCA ACTTCCTGAT TCCGAAGCTG CCTGCCCCCA AGGAGGAGGA TCTGTCCAAG GGTGTGCTGG AGGCCATCGA CATGGACAGC TACCGCGCTC AGGCCCAGGC GTCCATGCGC ATGGCGATGG ATGACGCAGA TGCCTTTGTC GAACCTCCAC CCCCCGGAGG TAGCGGAGGC AGCGGCGAAC CAGAGCTGGA CAGGCTGTCG AACATCATCA AGCAGTTCAA CGACCTGTTC GGCAACATCG AGTGGCATGA CGCCGACAAG ATTCGCAAGG TCGTCACCGA AGAGATTCCG GCGCGCGTCG CGCAGGACAA GGCCTACCAG AACGCACAGG CGAACTCGGG CAAGCAAAAC GCCAGGCTGG AGCATGACAA AGCGCTCAAC CGCGTGGTGC TGGAGCTGCT CGACGACCAC ACCGAACTCT TCAAGCAGTT CAGCGACAAC CCGAACTTCA AGCGCTGGCT GGCGGACATG GTGTTCGACT CGACCTACCG CCCAGGACAG AAACCGTCAG TGCCGCCTCA ATCGGGCGCC CAAGCCTGA
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Protein sequence | MSTTDTSEKG LEALIVRDLV ASGYVQGHAA DYNRDVALDV TQLLAFLRAT QPKVVETLNL GAEGIQRTQF LHRLQGEITK RGVVDCLRRG VSHGPVHVDL YKLLPTPGNA AAAEAFGKNI FSVTRQVRYS NDESQRALDM VIFINGLPVL TFELKNSLTK QTVADAIVQY QTDRNPDELL FQLGRCVAHM AVDDAEVRFC THLTGKTSWF LPFNQGWNSG AGNPPNPHGL KTDYLWKQVL VKESLANIIE NYAQLVEEEA EDANGRKRKT RKQIFPRYHQ LRTVRALLRR SQADGVGKRY LIQHSAGSGK SNTIAWLAHQ LVELKTAADA GQAQFDSVIV ITDRRALDTQ IARTIRSYDH VASIYGHSES AEELRTFLRR GKKIIVTTVQ KFPFILDELG DLGDKKFALL IDEAHSSQGG KTTAKMHLAL SGQAAEGGED EEEESVEDKV NALIESRKML ANASYYAFTA TPKTKTLELF GERQVVGDTV QFRSPEELTY TTKQAIQEGF ILDVIANYTP VSSFYHIAKT VEHDPEVDKA KALKKIRRYV ESHDKAIRRK AEIMVDHFIE QVIGAKKIGG KARAMIVCNG IARAIDYFRE VSDYLREIKS PYKAIVAYSG DFEVGGVKKT EADLNGFPSK DIPAKLRQDP YRFLIVANKF VTGFDEPLLH TMYVDKPLAG VLAVQTLSRL NRAHPQKADT FVLDFADNAE AVKAAFQEYY RATIQEGETD PNKLHDLKSD LDAQQVYSWQ QVEDLVAQYL GGAERDQLDP ILDACVAEYV EKLSEDDQVK FKGKAKAFVR SYGFLAAILP YGHPAWEKLS IFLNFLIPKL PAPKEEDLSK GVLEAIDMDS YRAQAQASMR MAMDDADAFV EPPPPGGSGG SGEPELDRLS NIIKQFNDLF GNIEWHDADK IRKVVTEEIP ARVAQDKAYQ NAQANSGKQN ARLEHDKALN RVVLELLDDH TELFKQFSDN PNFKRWLADM VFDSTYRPGQ KPSVPPQSGA QA
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