Gene MCA0043 details

Gene Information

• Locus tag: MCA0043
• Symbol: rpiB
• ID: 3103899
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 44293
• End bp: 44721
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169269
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_112583
• Protein GI: 53802779
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAG GCATCGCATC CGATCACGCC GGTTTCGATT ACAAAGAACG GCTCCGTGCC 
TGGCTCGCTT CGCTCGGCCA TGAGGTCGTC GACTACGGCT GTTTCAGCGA CGAGCGCACC 
GATTATCCCA CCTGGATACG CCCCTGCGCG CAGGCCGTGG CCGCCGGCGA GGTCGAGCGC 
GGCATCGTGC TCGGCGGCAG TGGCAATGGC GAGGCCATCG TCGCCAACCG GGTCAAAGGC 
TGCCGTTGCG GCTACTGCTT CAACGAAGAA ACCGCCTACC TCACCCGTTG GCACAACGAC 
GCCAACTGCA TCGCCATCGG CCAGCGCATC GTGACTTTGG ACATGGCCAA GAAGATCGTC 
GAGACCTTTC TCTCGACCGG CTTCGAGGGT GGCCGGCACA TTCCACGGAT CGTGGCGATC 
GACGCCTAG 

 

Protein sequence

MKIGIASDHA GFDYKERLRA WLASLGHEVV DYGCFSDERT DYPTWIRPCA QAVAAGEVER 
GIVLGGSGNG EAIVANRVKG CRCGYCFNEE TAYLTRWHND ANCIAIGQRI VTLDMAKKIV 
ETFLSTGFEG GRHIPRIVAI DA