| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0012 |
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| Symbol | atpD-1 |
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| ID | 3103591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 9293 |
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| End bp | 10675 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637169239 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_112553 |
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| Protein GI | 53802691 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTG GGAAAATCGT ACAGATCATC GGCGCGGTGG TCGACGCGGA ATTTCCGCGC
GAATCCTTAC CGAAGATTTA CGACGCATTG CGCGTCGACG AGGTCGGCCT CGTCCTGGAA
GTCCAGCAGC AGCTGGGCGA CGGTGTGGTG CGCTGCATCG CCATGGGTTC CACCGACGGG
GTCCGGCGCG GCGTCACGGT GACCAACACC GGTGCGCCGA TCTCGGTACC GGTGGGCACG
GAGACCTTGG GTCGCATCAT GAACGTGCTG GGCGATCCCA TCGACGAGAA GGGACCGATC
GGCGAGAAGG AACGCTGGGG CATCCACCGC AAGGCGCCTT CCTATCAGGA CCAGGCGGCC
GCCAACGAAT TGCTGGAGAC CGGCATCAAG GTGATCGACC TGATCTGCCC GTTCGCCAAA
GGCGGCAAAG TCGGGCTGTT CGGTGGCGCC GGCGTGGGCA AGACCGTCAA CATGATGGAG
CTGATCCGCA ACATCGCCAT CGAACACAGC GGCTACTCGG TGTTCGCGGG CGTAGGCGAA
CGTACCCGTG AGGGTAACGA CTTCTACCAC GAAATGAAGG AATCCAACGT TCTCGACAAG
GTGTCGCTGG TTTACGGCCA GATGAACGAA CCGCCGGGCA ACCGTCTGCG CGTGGCTCTG
ACCGGCCTGA CCATCGCCGA GAAGTTCCGC GACGAAGGCC GTGACGTGCT GCTGTTCATC
GACAACATTT ACCGCTACAC CCTGGCGGGT ACGGAAGTGT CGGCCCTGCT CGGGCGCATG
CCTTCGGCCG TGGGTTACCA GCCCAACCTG GCGGAGGAAA TGGGTATTCT GCAGGAGCGC
ATCACCTCCA CCAAGACCGG TTCCATCACG TCTATCCAGG CCGTGTACGT TCCGGCCGAC
GACTTGACCG ACCCGTCTCC GGCGACCACC TTCGCGCATC TCGACGCCAC CGTCGTGCTG
TCGCGCCAGA TCGCCGAGCT GGGTATCTAC CCGGCGGTCG ATCCGCTGGA TTCCACCAGC
CGCCAGCTCG ATCCGCTGGT AATCGGGCAC GAGCATTACG AGACGACCCG CCGGGTGCAG
AGCACTCTGC AGCGCTACAA GGAGCTGCGC GACATCATCG CCATCCTCGG CATGGACGAG
CTGTCGGAAA ACGACAAGCT GATCGTCTCG CGCGCCCGCA AGATCCAGCG CTTCCTGTCG
CAGCCGTTCT TCGTGGCCGA GGTGTTCACC GGCTCGCCCG GCAAGTACGT TCCCCTCAAG
GACACGATCG CCGGTTTCAA GGGGATCGTC GACGGAGACT ACGACGACGT GCCGGAGCAG
GCGTTCTACA TGGTCGGTTC GATCGACGAG GCGCTGGAGA AAGCCAAACG CCTGGCCGCT
TGA
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| Protein sequence | MSSGKIVQII GAVVDAEFPR ESLPKIYDAL RVDEVGLVLE VQQQLGDGVV RCIAMGSTDG
VRRGVTVTNT GAPISVPVGT ETLGRIMNVL GDPIDEKGPI GEKERWGIHR KAPSYQDQAA
ANELLETGIK VIDLICPFAK GGKVGLFGGA GVGKTVNMME LIRNIAIEHS GYSVFAGVGE
RTREGNDFYH EMKESNVLDK VSLVYGQMNE PPGNRLRVAL TGLTIAEKFR DEGRDVLLFI
DNIYRYTLAG TEVSALLGRM PSAVGYQPNL AEEMGILQER ITSTKTGSIT SIQAVYVPAD
DLTDPSPATT FAHLDATVVL SRQIAELGIY PAVDPLDSTS RQLDPLVIGH EHYETTRRVQ
STLQRYKELR DIIAILGMDE LSENDKLIVS RARKIQRFLS QPFFVAEVFT GSPGKYVPLK
DTIAGFKGIV DGDYDDVPEQ AFYMVGSIDE ALEKAKRLAA
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