Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MARTH_orf284 |
Symbol | truB |
ID | 6417810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma arthritidis 158L3-1 |
Kingdom | Bacteria |
Replicon accession | NC_011025 |
Strand | + |
Start bp | 259803 |
End bp | 260660 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 4 |
GC content | 31% |
IMG OID | 642715443 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001999884 |
Protein GI | 193216642 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00589486 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTATC AAATCAATAA AAAAAGAGGG ATTTCAAGCT TCAAAGCTAT TAAAGAATTT GCCAAAGAAA ATCATATTAA AAAAATTGGT CACGCCGGTA CTTTAGATCC TCTAGCACAA GGACTTTTAA TAGTCGCAAC TGACCAAGAC ACTAAAATGC TTTCTTTGAT TGCAAACGAT GATAAAGAAT ATTATGTAAA AGCTTTTTTA CATCGTTCAA GTGCAAGTTA CGATGAAGGT GAACCAATTA CCTATTTAGA AAATAAACAC ATCACTAAAG AAATGTTGCT AAAAGTTTTA GATGAGCTTA AAAATACCAC CACACAACTA CCACCTGCTT TTAGCGCCAA AAAAGTAAAT GGGGTACGAA GCTATTTACT AGCAAGGGAT AATAAAAATG TGGTTCTAAA ACCTAATGCC ATTAAAATTC ACTACATAAA ATTAATTGAT TTTAACTATG AAGAGCAGAG TTTTATTTTT GAAACTAAAG TATCAAAAGG CACTTATATT CGGTCGATGG TGCATGATAT AGGTCTAATG TTGGCCACCG ATGCTTGCAC AAATATTTTG AAAAGAACTA AGGTTGGAAA CATTTCTTTA GATGAAAAAA ATAACTTTTC AAAAATTAAT GATATTAGGA AATTATTTGG GGTATCATTA TATACGTTAA CAAAAAATCA AATTATTTTG CTCGCCAAAC AGCAGCCGCT TTTTATTGAA AATTTGGCAA TGCAAAATGA TCAAACAATA TTTACTTTCT TAAACGAAAT AATCGGATAC GGAACGGTCG AACATGGTAA TATAAAATTT ACCAAACTTT TTTACCCCGT TTTAGACAAG ATTATTAAAG GAGAATAG
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Protein sequence | MFYQINKKRG ISSFKAIKEF AKENHIKKIG HAGTLDPLAQ GLLIVATDQD TKMLSLIAND DKEYYVKAFL HRSSASYDEG EPITYLENKH ITKEMLLKVL DELKNTTTQL PPAFSAKKVN GVRSYLLARD NKNVVLKPNA IKIHYIKLID FNYEEQSFIF ETKVSKGTYI RSMVHDIGLM LATDACTNIL KRTKVGNISL DEKNNFSKIN DIRKLFGVSL YTLTKNQIIL LAKQQPLFIE NLAMQNDQTI FTFLNEIIGY GTVEHGNIKF TKLFYPVLDK IIKGE
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