Gene MARTH_orf239 details

Gene Information

• Locus tag: MARTH_orf239
• Symbol: deoC
• ID: 6418369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycoplasma arthritidis 158L3-1
• Kingdom: Bacteria
• Replicon accession: NC_011025
• Strand: +
• Start bp: 223727
• End bp: 224380
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 4
• GC content: 32%
• IMG OID: 642715396
• Product: deoxyribose-phosphate aldolase
• Protein accession: YP_001999851
• Protein GI: 193216609
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0274] Deoxyribose-phosphate aldolase
• TIGRFAM ID: [TIGR00126] deoxyribose-phosphate aldolase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.000190899
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATACA ATAAACTAGT GGATCATACC TTACTAGCTC CACAAGCAAC TGTTCATGAT 
ATTGATAAAT TAATTGATGA AGCAATTAAA TACGACTTTA AATCAGTGTG CATTGCTCCA 
ACTTGAATTA AACACGCTAA AGAAAAATTA GCTAAAAGTG ATGTTTTAGT GTGTACAGTT 
ATTGGCTTTC CATTAGGTTC AAATGCAACT AGTGTGAAGG TTTACGAAAC TAAAATTGCA 
ATCGCTCATG GCGCTGACGA AATTGATATG GTTATTAATA TTGGCCGTTT CAAAAATAAA 
GAATACGAAT TTGTTTTGAA TGAAATTAAA GCAATTAAAG AAGAATGTGG TTCAAAAACT 
TTAAAAGTTA TTGTTGAAAC TGCTCTTTTA ACTAATGAAG AAATTGCTAA GGTGACCGAA 
ATTGTTATGC AATCAGGTGC TGAATTCATT AAAACTTCTA CAGGCTTTTC ATACCGTGGT 
GCTTCGTTTG AAGATGTTGA AATTATGAAA AGAGTGGCAC AAGACAAATT ACTTATCAAA 
GCATCAGGCG GCATTAAAGT TGGCGATGAT GCAATTAAAA TGGTTGAACT AGGAGCAAAC 
CGTTTAGGAA TGTCTAAATC AATTCAAATC ATGGAAGACC TAGAAAAAAA ATAA 

 

Protein sequence

MKYNKLVDHT LLAPQATVHD IDKLIDEAIK YDFKSVCIAP TWIKHAKEKL AKSDVLVCTV 
IGFPLGSNAT SVKVYETKIA IAHGADEIDM VINIGRFKNK EYEFVLNEIK AIKEECGSKT 
LKVIVETALL TNEEIAKVTE IVMQSGAEFI KTSTGFSYRG ASFEDVEIMK RVAQDKLLIK 
ASGGIKVGDD AIKMVELGAN RLGMSKSIQI MEDLEKK