| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04101 |
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| Symbol | |
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| ID | 6775252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4410458 |
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| End bp | 4411783 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757552 |
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| Product | inner membrane protein, 60 kDa |
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| Protein accession | YP_002128385 |
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| Protein GI | 196158896 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.117414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCGC AACGTAGTTT TCTGATAATT GGCCTCGCGC TAGTTAGCTT TTTGCTTTGG
CAACAATGGC AAAAAGATTA TGGGCCACAG CCTGTAGAAC CCGTTGAGCA ACAAGCTCAA
CAGACAACGC AAGGTGTACC GTCTTTTAAC GATACGGGTA ATGAAGACGT ACCAAGCAGC
GATAGTGTGC CTGCCGCACA GCCTGCTGTG ACTGCGCAGT CTACCAACCG TATTATCGAA
GTAAAAACAG ATACGTTAGA CCTGCGCATC GATTTGCTCG GCGGAGATGT TATATCAGCA
GACCTGCTAA AATTTCCAGT AGAGCAAGGC TCAGACATTC CATATAGCTT GCTTCGTTCA
GGCAATGGTC TTTACGTAGC CCAAAGCGGT CTTATCGGTG CCCAAGGCCC AGATGCAAGT
GCAAATGGCC GCCCTGTTTA TACAGCGCAA AGCGAATTCT ATGAAATGAC CGGCGATACC
CTTGTTATTC CATTAACTTG GAAAAACAAT CAAGGCCTGT CTATTACTAA AACATTTACG
TTTACAAAAA ACCACTACGA CGTAAACGTA AGCTACGACA TTAACAATGG TACGGGCAGT
GCCGCTACGG TTCAGCCGTA TGCTCAGTTA AAGCAGGTTA TGGAGTTCGA AGACGACGGT
AATATGTTTA TGCCAACCTA CCGCGGTGCG GCATATTCGA CAGAAGACGA CCGTTATCAG
AAATACTCTT TTGACGAAAT AGAAGATGAC AACTTGCGTG AAACTACAAA AGCAGGTTGG
GTTGGCATGC TCGAGCATTA TTTCGTATCA GCATGGGTGC CTTCGCAAGA ACAAACGAAT
ACGGTTTATT CACGTAACCT GAAAAATCAA TATGCCGTTA TTGGTGTGTT ATCGCCGTCT
GAAACGGTTG CTTCTGGCGA TACCAAAACC ATAGCTTCTA CCCTTTACAT GGGTCCAAAA
GACCAAGATA AATTAGCAAA AATTGCACGT GGTTTAGATC TAACCGTTGA TTACGGTATC
CTTTTCTGGA TTTCTCAGCC TCTGTTTGCC CTGCTTACTT TCCTTCACAG CTTAGTCAAC
AACTGGGGTG TCGCGATTAT CCTTATCACT ATTGTAGTGA AAGGTGCTAT GTACTGGTTA
ACTAAGAAGC AGTACGAATC AATGGCTCGT ATGCGCAACC TTGCACCTAA GATGCAACAG
TTGAAAGACC GCTTTGGCGA TGACAGACAG AAAATGTCTC AAGCCATGAT GGAGCTATAT
CGCAAAGAAA AAGTGAACCC AATGGGTGGA TGTTTACCAC TTCTTCTGCA ATGCCTATCT
TCCTAG
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| Protein sequence | MESQRSFLII GLALVSFLLW QQWQKDYGPQ PVEPVEQQAQ QTTQGVPSFN DTGNEDVPSS
DSVPAAQPAV TAQSTNRIIE VKTDTLDLRI DLLGGDVISA DLLKFPVEQG SDIPYSLLRS
GNGLYVAQSG LIGAQGPDAS ANGRPVYTAQ SEFYEMTGDT LVIPLTWKNN QGLSITKTFT
FTKNHYDVNV SYDINNGTGS AATVQPYAQL KQVMEFEDDG NMFMPTYRGA AYSTEDDRYQ
KYSFDEIEDD NLRETTKAGW VGMLEHYFVS AWVPSQEQTN TVYSRNLKNQ YAVIGVLSPS
ETVASGDTKT IASTLYMGPK DQDKLAKIAR GLDLTVDYGI LFWISQPLFA LLTFLHSLVN
NWGVAIILIT IVVKGAMYWL TKKQYESMAR MRNLAPKMQQ LKDRFGDDRQ KMSQAMMELY
RKEKVNPMGG CLPLLLQCLS S
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